Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00547 ATGCAATACGAGTACGAGAATTATGATCCATCGTTTCCTGACCAACCTGTGGTTGACCAATACCTCCCAATTTGGGCCAACTTACCAGCCTTCAGAACCAAACCAGCCTTCATTTGGGCTGAAGAATTGGTCACCTCCACACCCCTCCTCCTCACCTATGCACAACTCAATGCCTCTGTTCAGGTCATCTCTTCTCAACTACTCGTTCCACTACAAAGAGGTGACACAGTCCTGCTTCTGTGCTCTCCAGGACTGGACTTAGTTGAGGTCATCTTTGGGTGTCAAAGGGCTGGTCTTTTAAGTGTCCCTATCATTCCTCCTCACCCTTCTTTTGCTAATCAAAACTATCACCACCTCATAAGGGCCATTTCACAGACCAAGCCTAAAGCTGCCATTGCTCACCCTCATTACATATCAAGCATTCAACACTACATCTCTTCCTCCCACAACAACAACAACAACAAACTTGCTCACATGTTACAAAGCCTTCATTGGATTTCCATTGATCATATCAAACGTGGCAATGTTAATTCAAGTAACTGTGACTCCATGTCATACAGTGGTTGCAAAGCAGATGAGGTTTATTTGGTTCAGTACACCTCTGGTGCCACTGGGATTCCCAAACCTGTGCTTGTCACAGCTGGCTCTGCTTCTCATAACGTTAGGACTGCAAGGAAAGCTTATGATCTTAATCCAAACAGTACTATTGTTTCATGGCTTCCTCAATACCATGATTGTGGCCTCATGTTTCTGTTGCTGACAATTGTATCAGGAGCTACTTGTGTTCTCACATCCCCAACTGCGTTCATCAAACGCCCAAGACTCTGGCTTGAGTTGATGTCAAAATTCAAGGCCACATGCACCCCTGTTCCATCATTCACATTGCCACTTGTTGTCAAGCGTGGAGGGATTGACAAAGGAACTTTACCCATAAATCTATCAACTTTGAAGAACCTTATAATCATCAACGAACCAATCTACAGAGATTCAGTGGAAGAATTTGTTCACACCTTTTCACCATTTGGGTTAAGCCCCTCATCTATCTCTCCTTCTTACGGTTTAGCAGAGAATTGTACCTTTGTTTCCACTGCGTGGAGGGGTCACAGTGATAGTAGTGACACTAACACCTTTCCAACTCACAAGAAGCTGTTGCCAGTTGCAAGGCTCTCCTCACAGAACAGAAATGAGGAACAAGAAGATGTGGAAATCATGGTTGTTGATGAAGAAACGTTTGAACCAGTTGAGGATGGTGTTGAAGGAGAAATTTGGGTTTCATCACCAAGCAACGCCTCTGGCTACTTGGGTCACCCTTCTTTAACAAGGGAAGTGTTTCATGCAAGACTAAGAAACATGGTTCGAAGGTACTTTCTTCGAACAGGTGATAGGGGAATTGTGAAAGGAGAATGCAGGTATCTTTTTGTAACTGGTCGCTGTCAAGAAGTTATCAAGCTACAAAATGGTGAAAAAATTCATCCTCATTATATAGAGACTGCGGCTTATAACAGTTGTTCGAAGTTCCTAAGAGGAGGTTGCATTGCAGCTTTTGAAGTTTCAACAACTGTTGCAGTTGTGGCAGAGATGCAGAGGATGGAAAAGGAGATGGATATTGGGGTACTGAGGAGAGTTTGTCAAGGAATTAGAGAAGGTGTTATGAGGAAAGAGAAGGTAGAGGTTGGATGGGTGGTTTTGGTTAAGAGTGAAAGCGTTCCGAAAACTACTTCTGGAAAATTACAGAGATGGGTAGCTAAGGAGAAGCTTCTTGCAGGAAAAATGGTTATTCTGATGGAAATGCGATTTGGAAAAGATCACAGGGGAACACAAGAGGTAATGAGAGTGGCTAAGGAAGAGAAGTGTTCACTTTTATGTGCAGAAACTCGTGGCTCATTGATGTCACATCTATGA 1902 0.4343 MQYEYENYDPSFPDQPVVDQYLPIWANLPAFRTKPAFIWAEELVTSTPLLLTYAQLNASVQVISSQLLVPLQRGDTVLLLCSPGLDLVEVIFGCQRAGLLSVPIIPPHPSFANQNYHHLIRAISQTKPKAAIAHPHYISSIQHYISSSHNNNNNKLAHMLQSLHWISIDHIKRGNVNSSNCDSMSYSGCKADEVYLVQYTSGATGIPKPVLVTAGSASHNVRTARKAYDLNPNSTIVSWLPQYHDCGLMFLLLTIVSGATCVLTSPTAFIKRPRLWLELMSKFKATCTPVPSFTLPLVVKRGGIDKGTLPINLSTLKNLIIINEPIYRDSVEEFVHTFSPFGLSPSSISPSYGLAENCTFVSTAWRGHSDSSDTNTFPTHKKLLPVARLSSQNRNEEQEDVEIMVVDEETFEPVEDGVEGEIWVSSPSNASGYLGHPSLTREVFHARLRNMVRRYFLRTGDRGIVKGECRYLFVTGRCQEVIKLQNGEKIHPHYIETAAYNSCSKFLRGGCIAAFEVSTTVAVVAEMQRMEKEMDIGVLRRVCQGIREGVMRKEKVEVGWVVLVKSESVPKTTSGKLQRWVAKEKLLAGKMVILMEMRFGKDHRGTQEVMRVAKEEKCSLLCAETRGSLMSHL. 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00547 633 Gene3D - 5 478 IPR042099 -
Seca4g00547 633 CDD FAAL 26 588 IPR040097 GO:0008610
Seca4g00547 633 Gene3D - 481 598 IPR045851 -
Seca4g00547 633 SUPERFAMILY Acetyl-CoA synthetase-like 29 588 - -
Seca4g00547 633 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 8 596 - -
Seca4g00547 633 Pfam AMP-binding enzyme 34 485 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00547 Seca-Chr4 8967109 8969010 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00547 189 579 Monolignol Biosynthesis Gene Families AT4G19010 26.250 8.21e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00547 - - gmx:102666455 964.526