Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00537 ATGGGAGCCGAAAGCTTTTGTGAGAACCAAAACCACCAACACCATGAGGCTGAGGCTCCCTTCATTCTGGGTCTTCAGCCATCTGCGCTCGTTGATAGCGTCGCTCACGTTGATTGCTCCTTGCTCGATCGAATTCCCGGTGAACGCGGTGGCTCCGTTGCCGTTGCAATTGAAGAACTTGAATCCATACTGAGAGAGGTTAAATCTATATCTCATGATGCTCATTCTCATTCTTCTCCAATGAAGACCATGGCTGGTGGCAGTGTTGCTAATACAATTCGAGGTCTAAGTAGTGGTTTTGGAATTTCTAGTGGAATTATTGGAGCGTGTGGGGATGATGAACAAGGTCAGCTATTTGTCAATAACATGACCTTCAATGGTGTCGACCTCTCTAGACTCCGTAAGAAGAAAGGACACACTGCACAGTGTGTTTGCTTGGTTGATGCATTGGGTAATCGTACAATGCGACCCTGTCTCTCAAATGCTGTCAAAGTTCAGGCAGAAGAATTGATGAGAGAGGATTTCAAGGGCTCCAAGGTTAGTTTGCTGCTTGATCAATTAAAGTATTGA 570 0.4561 MGAESFCENQNHQHHEAEAPFILGLQPSALVDSVAHVDCSLLDRIPGERGGSVAVAIEELESILREVKSISHDAHSHSSPMKTMAGGSVANTIRGLSSGFGISSGIIGACGDDEQGQLFVNNMTFNGVDLSRLRKKKGHTAQCVCLVDALGNRTMRPCLSNAVKVQAEELMREDFKGSKVSLLLDQLKY. 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00537 189 Pfam pfkB family carbohydrate kinase 69 170 IPR011611 -
Seca4g00537 189 PANTHER SUGAR KINASE 4 180 - -
Seca4g00537 189 SUPERFAMILY Ribokinase-like 28 182 IPR029056 -
Seca4g00537 189 Gene3D - 26 187 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00537 Seca-Chr4 8839220 8840312 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00537 - - psat:127080309 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00537 4 8839220 8840312 Seca4g00537 4 8839220 8840312 ECH
Seca4g00537 4 8839220 8840312 Seca4g00537 4 8839220 8840312 PCT