Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00533 ATGTACTTTGTTTCTAAGACATTGGCAGAGAAAGAAGCATGGAAATTTGCCGAAGAGAACAATATGGACTTTGTCACAATTATTCCAAGTCTTGTAGTTGGTCCCATTCTTACGCCAATAATGCCAAGTAGCCTCAGTACCGCTCTTTCACTCATCACCGGTAATGAGGCCTTATATTCAATCATAAAACAAGGCCAATACATTCACGTGGATGACGTTTGTCTTGCCCATATATTCTTGTTCGAGCATCCAAAAGCAGAAGGGAGGTATATATGCTCTGCCCACGATGCCAACATCCATGACATTGCAAAATTGCTAAAGGAAAAATACCCAGAGTACAATATCCCCACAATGTTCAAGAATATTCCAGATCAATTGGAGGTTGTTCACTTTTCTTCCAAGAAGATCACAGATGCAGGATTTCAATTTAAATACAACTTAGACAATATGTTCACAGAAGCTGTTGATGCATGCAAAGAAAAAGGGTTCATTCCTAAATGA 501 0.3892 MYFVSKTLAEKEAWKFAEENNMDFVTIIPSLVVGPILTPIMPSSLSTALSLITGNEALYSIIKQGQYIHVDDVCLAHIFLFEHPKAEGRYICSAHDANIHDIAKLLKEKYPEYNIPTMFKNIPDQLEVVHFSSKKITDAGFQFKYNLDNMFTEAVDACKEKGFIPK. 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00533 166 FunFam Dihydroflavonol reductase 1 166 - -
Seca4g00533 166 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 162 IPR036291 -
Seca4g00533 166 Gene3D - 1 166 - -
Seca4g00533 166 Pfam NAD dependent epimerase/dehydratase family 2 87 IPR001509 -
Seca4g00533 166 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 2 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00533 Seca-Chr4 8801146 8804655 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00533 2 164 Monolignol Biosynthesis Gene Families AT5G58490 36.810 2.45e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00533 K13082 - gmx:548087 262.692