Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00527 ATGTACACCAGATTTTGCTATATCAAGTTCAAAATTGCAGGACAGGACACTATAGCAATTGCAATGACATGGATGATCAAATTTGTGGATGAGAATCAGGAGGTTCTTAATACACTTATGAAGGAGCAACAAGAGATTGAGAAAAAAGGTACAGGAAGTGATTATCTTACATTAGAGGCTCTTAATGAGATGCCATATGCTTCCAAGGTCGTAAAAGAAGCGTTAAGGATGGCATCCGTAGTGCAGTGGTTGCCCAGAGTAGCACTAGAGGACTGTGAGATTGAAGGATTTAAAATCAAGAAAGGGTGGAACATTAATATTGATGCTAGATCAACACACCATGATCCAACTCTGCACAAGGATCCGGATGTGTTCAATCCTTCAAGATTTCCTGCAGAGTCAAAACCATACAGCTTCCTAGCTTTTGGGATGGGAGGAAGGACGTGCCTTGGGAAGAACATGGCTAAAGCCATGATGTTGGTGTTTCTCCACCGTCTCAACACTAGTTACAAGTGGAAGGTGATTGATTCTGACTCAAGTATTCAGAAATGGGCGCTTTTTACAAAACTGAAGAGTGGATGTCCAGTGCGGTTGATATCTATGAAGAAGGACACAAATAAAACTGAGACAGGTTAA 636 0.4119 MYTRFCYIKFKIAGQDTIAIAMTWMIKFVDENQEVLNTLMKEQQEIEKKGTGSDYLTLEALNEMPYASKVVKEALRMASVVQWLPRVALEDCEIEGFKIKKGWNINIDARSTHHDPTLHKDPDVFNPSRFPAESKPYSFLAFGMGGRTCLGKNMAKAMMLVFLHRLNTSYKWKVIDSDSSIQKWALFTKLKSGCPVRLISMKKDTNKTETG. 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00527 211 Coils Coil 29 49 - -
Seca4g00527 211 PRINTS B-class P450 signature 149 160 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g00527 211 PRINTS B-class P450 signature 114 129 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g00527 211 PRINTS B-class P450 signature 69 80 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g00527 211 PRINTS B-class P450 signature 86 113 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g00527 211 PRINTS B-class P450 signature 140 149 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g00527 211 SUPERFAMILY Cytochrome P450 8 199 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g00527 211 PRINTS P450 superfamily signature 149 160 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g00527 211 PRINTS P450 superfamily signature 69 80 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g00527 211 PRINTS P450 superfamily signature 13 30 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g00527 211 PRINTS P450 superfamily signature 140 149 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g00527 211 Pfam Cytochrome P450 7 179 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g00527 211 Gene3D Cytochrome P450 7 201 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g00527 211 PANTHER CYTOCHROME P450 26 9 176 - -
Seca4g00527 211 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 142 151 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00527 Seca-Chr4 8684667 8686542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00527 12 172 Cytochrome P450 AT1G19630 65.839 1.46e-75 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00527 - - lang:109327951 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00527 4 8684667 8686542 Seca4g00527 4 8684667 8686542 ECH