Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00514 ATGTCTTTGATCAAAGTCAGTCTTCTTGTATTAACTTCACTCTCAGTCTCAGCCACTCTCTTCAAAGCTCACCATAGCTTCCATTTTGGCTTGGGTGATGGCGCTGGAAATGGGGTGAAATCTTTCAGTCTCTATCCTGAGTTCTATCAGTTTTCATGTCCCCAAATTGATGACATTATAATGTCAGTGTTGGAGAAGGTCATTGCTATGGATCCCAGAATGGCTGCCTCTCTGCTTAGACTTCACTTTCATGACTGCTTTGCACAGGGCTGCGATGCATCAATTTTGTTGGATGATAGCACGACAATTATTGGTGAAAAGAATTCTGGACCAAACAAAAATTCTATAAGAGGTTTTGAAGTGATTGATGAGATGAAATCCAAGTTAGAAGAAGCATGTCCTCATACTGTCTCCTGCGCAGACATAGTCGCCCTTGCTGCCAGGGGCTCCATTTTGCTTAGCGGAGGACCAAACTGGGAACTCCCATTAGGCAGGAGAGACTCAAAAACAGCAAGCTTAAGCCTCTCAAGCAAAAGCATTCCCCCTCCAAATTCCACCATTCAAACTCTCATAACATTTTTCAAACGTCAAGGTCTTGATGAAGTTGACCTTGTCGCCCTCTCTGGTGGGCATACAATTGGGATGGCAAGATGTGGAACATTCAAACAGAGGCTGTACAACCAATCAAATGAGACTCTAGAGAAATCCTTCTACTTTGGTTTGAAAACAGTGTGCCCAAAGTCAGGTGGTGACAATAATATTGTTCCATTAGACTATGGCTCCCCAAGAAAATTTTATAATTCATACTTCAAACTTATACTTTGGGAAAAAGGACTACTTAATTCGGATGAGGTGCTTTTGACAGGAAATGTGAAGTTGACACAGGAATTGGTGAAGAAATATGCAGAAGATGAGAGTCTATTCTTTGAACAATTTGCTAACTCCATGATCAAAATGGGGAACATCAGTCCTCTCATTGGATTTCACGGTGAAGTTAGGAAGATTTGTCGCCGAGTTAATTAA 1023 0.4154 MSLIKVSLLVLTSLSVSATLFKAHHSFHFGLGDGAGNGVKSFSLYPEFYQFSCPQIDDIIMSVLEKVIAMDPRMAASLLRLHFHDCFAQGCDASILLDDSTTIIGEKNSGPNKNSIRGFEVIDEMKSKLEEACPHTVSCADIVALAARGSILLSGGPNWELPLGRRDSKTASLSLSSKSIPPPNSTIQTLITFFKRQGLDEVDLVALSGGHTIGMARCGTFKQRLYNQSNETLEKSFYFGLKTVCPKSGGDNNIVPLDYGSPRKFYNSYFKLILWEKGLLNSDEVLLTGNVKLTQELVKKYAEDESLFFEQFANSMIKMGNISPLIGFHGEVRKICRRVN. 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00514 340 Pfam Peroxidase 62 304 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g00514 340 ProSiteProfiles Plant heme peroxidase family profile. 43 340 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g00514 340 FunFam Peroxidase 181 319 - -
Seca4g00514 340 Gene3D Peroxidase, domain 2 181 320 - -
Seca4g00514 340 FunFam Peroxidase 47 189 - -
Seca4g00514 340 SUPERFAMILY Heme-dependent peroxidases 44 340 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca4g00514 340 PRINTS Plant peroxidase signature 136 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g00514 340 PRINTS Plant peroxidase signature 256 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g00514 340 PRINTS Plant peroxidase signature 314 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g00514 340 PRINTS Plant peroxidase signature 117 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g00514 340 PRINTS Plant peroxidase signature 202 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g00514 340 PRINTS Plant peroxidase signature 53 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g00514 340 PRINTS Plant peroxidase signature 77 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g00514 340 PRINTS Plant peroxidase signature 155 170 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g00514 340 PRINTS Plant peroxidase signature 272 289 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g00514 340 CDD secretory_peroxidase 44 339 IPR033905 GO:0004601|GO:0042744
Seca4g00514 340 ProSitePatterns Peroxidases active site signature. 75 86 IPR019794 GO:0004601
Seca4g00514 340 PRINTS Haem peroxidase superfamily signature 137 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g00514 340 PRINTS Haem peroxidase superfamily signature 258 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g00514 340 PRINTS Haem peroxidase superfamily signature 75 89 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g00514 340 PRINTS Haem peroxidase superfamily signature 203 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g00514 340 PRINTS Haem peroxidase superfamily signature 155 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g00514 340 Gene3D - 48 340 - -
Seca4g00514 340 ProSitePatterns Peroxidases proximal heme-ligand signature. 203 213 IPR019793 -
Seca4g00514 340 PANTHER PEROXIDASE 72-RELATED 43 339 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00514 Seca-Chr4 8345574 8347114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00514 8 340 Peroxidase AT1G44970 68.142 1.24e-164 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00514 K00430 - cave:132189332 498.819