Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00495 ATGGCTGATTCAGGTTCAGCCTCTTCTAGTAGAATGCAATGGTGCTCCATCCCAGAACGACTTCAACTGCATGCGGCCATGTTGGCCCTGCAGTTTGGCTATGCTGGTTTCCATGTCGTGTCAAGAGCTGCCCTTAACATGGGTGTCAGCAAACTTGTTTTCCCAGTCTATCGGAATATCATTGCTTTTCTCTTACTCCTTCCTTTTGCCTATTTCTTGGAAAAGAAGGAAAGACCTGCAATTACTTTAAACTTCCTCTTACAGTTCTTTCTTCTCGCCCTTGTCGGGATTACAGCCAACCAAGGATTCTACTTGCTTGGATTGGACAACACATCCCCAACCTTTGCATCAGCGATACAAAACTCTGTCCCAGCCATTACATTTCTCATGGCAGTTATACTCAGGCAAGCCCTTCTTCAGTTTCAGATAGAGCAAGTGCGGTTGAACAGAAAGGATGGGATAGCGAAGGTGGCGGGAACGGTATTCTGTGTTGCTGGGGCAACCGTGATTACACTTTACAAGGGTCCAACAATATACAGCCCAGTTCCACCACAACTAAACAGCAGTTACAGCACACCAGAGATATTTGGGTCACTCTCACTGGGAGATGCAAAGGGAAAGAACTGGACACTTGGGTGCCTTTACCTCATAGGGCATTGTTTGTCGTGGTCTGGTTGGCTTGTGCTGCAAGCTCCCGTTCTCAAGAAGTACCCAGCACGCCTCTCTGTCACTTCCTATACATGCTTCTTTGGACTCATCCAATTCCTTGTTATTGCTTTGATCGTTGAAAGAGATGCTCAGGCTTGGATGTTCCACTCTGGTGGAGAACTTTTCACAATTCTATACGCGGGAGTGGTAGCATCTGGAATTGCCTTCGCTGTACAGATATGGTGCATTGACAGAGGTGGCCCTGTGTTCGTTGCTGTGTATCAACCTGTTCAGACTCTTGTTGTCGCTATTATGGCTTCCTTTGCTTTAGGCGAAGAGTTCTACTTGGGAGGGATAATTGGGGCAGTATTGATCGTTGTGGGACTGTACCTAGTGTTGTGGGGTAAAAGTGAAGAGAAGAAGTTTGCAAAGGAAGAGGCTGCGATTACATCCACTACTCCTGAACATAGCAGCATTAGATCCGCAAGCCATGCCAAAGCATCACTCACTCAGCCTCTTCTCCCTTCATCAACGGAAAATGTCTAA 1194 0.4682 MADSGSASSSRMQWCSIPERLQLHAAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIAFLLLLPFAYFLEKKERPAITLNFLLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAVILRQALLQFQIEQVRLNRKDGIAKVAGTVFCVAGATVITLYKGPTIYSPVPPQLNSSYSTPEIFGSLSLGDAKGKNWTLGCLYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLIQFLVIALIVERDAQAWMFHSGGELFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWGKSEEKKFAKEEAAITSTTPEHSSIRSASHAKASLTQPLLPSSTENV. 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00495 397 PANTHER WAT1-RELATED PROTEIN 25 362 IPR030184 GO:0016020|GO:0022857
Seca4g00495 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 57 174 - -
Seca4g00495 397 Pfam EamA-like transporter family 27 136 IPR000620 GO:0016020
Seca4g00495 397 Pfam EamA-like transporter family 211 349 IPR000620 GO:0016020
Seca4g00495 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 353 - -
Seca4g00495 397 MobiDBLite consensus disorder prediction 366 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00495 Seca-Chr4 8104388 8107570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00495 1 397 Nodulin-like Gene Family AT1G75500 73.750 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00495 - - gmx:100798686 656.366