Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00459 ATGACAAAAGACTATTACTTTTTTGTTGATCAGGTTAGGTTATTCTTATCTGAGGAATCTCCTTCACAAGTTGGGTTAAATTCTCAAGATCACCTCCAAGCAAAGATATCATTGCAGCATCCAGGAGGAGCAGGTTCTGATGACATTCTGCCTCCTGGATTTGAAGGAACTCATGCTTCAAGTCAGTTTGAGATAAAGCCTTCCCAAATACCTGTTATTAGGTGGATTAATCCACCAAAGATTGTGCTGAATCTCGCATGGCAAGTGGTGGCCGGGGAAGAAAGCAAAGAGGTAGAAGATCAACATCAAAGGGAGAGGAGAGTACTTGAAGCTATTTATCCTCGCATATCTTCAATTCCTCCAAACCCTGCTGTTTCAATGGATGTTGAAAATTCCCATTACATTGATGGTCAAACTACTTTGATACCAATTACACCTATTGAAGATGAAGATGCGGCAGCAGATATAGTATCTGATTCCTTGGAACGGCAGTCTGTCGAATTACCTCCTGGTATATTGAAGGGTTCAAATTCTGCTACAAGTATCCAGTTACCTCATGGTCTAGTGTCTGATGTAGCTGCTGCATCTGTTGCTTTAACTAACATAGTGAAGAGCAATGAGCATGGAAATTTGATTGACCATGAATTACTAAAAAATATTCTCAACAATCCAGAAGTAATTGAGAAGTTGGTTAGAGATTATGGAGTTACTAATAATTCACTGCATGTACATAATGTGGGATCATCTTCAGTAGCTTTTTCACATCCTCCTATTCCTATTAATCAGGGAGAAACCACTACACCTTCACCAGTTGCTTTTTCAGCCACTTCCTATAATCACCCAACTGGAGGTCAGGTGGCAACTGTTTCTAGCCAATGGCATACTAGACCTGCAGTGAGTTCAGCTACTGTTTCTTCTTCTGCTGAGGTCCCTTCAACTAAAGATGTAAACTACTATAAGAGCTTAATTCAACAGCATGGAGGAGACAAACAAGAAACACTTCCATACTCCAGTAATCGTCAGATCCAGCAGCCAGTAACAAACTACGAGACACCATACAATATTAGAACAAAAGGGTCAAAACCAAAGATAATGAAGCCTTGTATCTTTTTTAACAGTTCTAGAGGATGTCGGAATGGTGCTAACTGTGCATACCAGCATGATGCATCATTTCAGCCACGAGGCAATAATGTATCAGGGATACAAAGTTCAAAGAGAATGAAAATGGATAATGAGATTAGCAGTTAA 1248 0.3982 MTKDYYFFVDQVRLFLSEESPSQVGLNSQDHLQAKISLQHPGGAGSDDILPPGFEGTHASSQFEIKPSQIPVIRWINPPKIVLNLAWQVVAGEESKEVEDQHQRERRVLEAIYPRISSIPPNPAVSMDVENSHYIDGQTTLIPITPIEDEDAAADIVSDSLERQSVELPPGILKGSNSATSIQLPHGLVSDVAAASVALTNIVKSNEHGNLIDHELLKNILNNPEVIEKLVRDYGVTNNSLHVHNVGSSSVAFSHPPIPINQGETTTPSPVAFSATSYNHPTGGQVATVSSQWHTRPAVSSATVSSSAEVPSTKDVNYYKSLIQQHGGDKQETLPYSSNRQIQQPVTNYETPYNIRTKGSKPKIMKPCIFFNSSRGCRNGANCAYQHDASFQPRGNNVSGIQSSKRMKMDNEISS. 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00459 415 ProSiteProfiles Zinc finger C3H1-type profile. 362 390 IPR000571 GO:0046872
Seca4g00459 415 MobiDBLite consensus disorder prediction 394 415 - -
Seca4g00459 415 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 248 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00459 Seca-Chr4 7405529 7407431 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Seca4g00459 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00459 - - cam:101501814 603.208