Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00455 ATGGGTTCTGTTTCTTTGAAAATAGGGGATGGAACAGCCAGATTCAAGAGAACATCTCTGTGTTCTTCAGCAGTTAACACTCTCATGATCTTCTGTGTTATCATCACCAACCTTTTCGCCCTTTATGCTTTCACTTCTTCCCCTAAAAACGATCACACCGAGCTACTTCACCAAGCCCACAAGAATTTCTCTCTCATCTCTGAACAGGTCTCGCTTATATTGAGAGAGATTGATATATCTCAGAAGAAACTGGCCCAGATGGAGAAAGAGCTTCTTGGCTATCAAAGCATTGATCTTTCAAGACCCAACATCGCAAATGAACTCAAACTCTTTCTCCAGCGCCACCAACTCCCTCTGGGCAAAGATTCCAAAACCGGAATCACTGAAATGGTGCCCTCTGTAGGCCATTCCTGTGAGAAATCTTCAGACTTGTTGTCTCAGTACATGAATTACAAAGTGTTTGGACCCTGCCCAGATGATTGGAGTGTCGCACAGAAACTGATCTTGCGAGGGTGTGAGCCTTTGCCTAGAAGGAGGTGTTTTGCTAAGTCTGTTTCTAAGGTAGGTCTTCATCCTTTTCCAGCTTCACTTTGGAAACCTGTTGGTAATAAAACTGTTAATTGGAGTGGTCTCAGTTGTAAGAATTTTGAATGTTTGAATGGTAAGAAGTTGAGTAGAGATTGCATTAGTTGCTTTGATTTGGTTAATGGGTACGAGAATCAGAGGTTTATAAAGTCTAGGAGTAAGAATGATTTTCTCATTGATGATGTGTTAGCCCTTGGAAGTGGTGGAATTCAAATTGGGCTTGATGTGGGAGGTGGGTCTGGATCCTTTGCTTCTATAATGGCTGATAGGAATGTTACAGTGATTACTAACACTCTGAATATTGATGCCCCATTCAGTGAATTCATTGCTGCAAGAGGACTTTTTCCTCTTTACTTAAGCTTAGATCATAGGTTCCCATTTTATGACAATGTGTTTGATTTGGTTCATGCTGCAAGTGTTTTGGATGTTGGAGGGAAGGCAGAGAAGTTGGAGTTTTTAATGTTTGACATTGATCGTATCTTGCGGGTTGGTGGGTTGTTTTGGCTGGATAACTTCTATTGTGCTAATGAAGAGAAGAAAAAAGCATTAACTCGGTTGATTGAAAGGTTTGGATATAAAAAGTTGAAATGGGTTGTGGGAGAGAAGGTTGATAATCTTGGATCAGGCAAATATGAAGTAGTCTTATCTGCTGTCCTTCAAAAGCCTATAAGGGTGTAA 1263 0.4086 MGSVSLKIGDGTARFKRTSLCSSAVNTLMIFCVIITNLFALYAFTSSPKNDHTELLHQAHKNFSLISEQVSLILREIDISQKKLAQMEKELLGYQSIDLSRPNIANELKLFLQRHQLPLGKDSKTGITEMVPSVGHSCEKSSDLLSQYMNYKVFGPCPDDWSVAQKLILRGCEPLPRRRCFAKSVSKVGLHPFPASLWKPVGNKTVNWSGLSCKNFECLNGKKLSRDCISCFDLVNGYENQRFIKSRSKNDFLIDDVLALGSGGIQIGLDVGGGSGSFASIMADRNVTVITNTLNIDAPFSEFIAARGLFPLYLSLDHRFPFYDNVFDLVHAASVLDVGGKAEKLEFLMFDIDRILRVGGLFWLDNFYCANEEKKKALTRLIERFGYKKLKWVVGEKVDNLGSGKYEVVLSAVLQKPIRV. 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00455 420 Coils Coil 70 90 - -
Seca4g00455 420 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 24 419 - -
Seca4g00455 420 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 228 388 IPR029063 -
Seca4g00455 420 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 268 364 IPR004159 GO:0008168
Seca4g00455 420 Gene3D Vaccinia Virus protein VP39 236 407 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00455 Seca-Chr4 7377707 7378969 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00455 - - gmx:100786204 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00455 4 7377707 7378969 Seca4g00455 4 7377707 7378969 ECH
Seca4g00455 4 7377707 7378969 Seca4g00455 4 7377707 7378969 PCT