Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00448 ATGTCACATTTTTGTGCCAGAACAATTGTGAAACAAGCAGGCTGTGATGAAAGCATCATTCCTCACCATGTTTTTGAATTTGTTAATCTTGATGATTTACAAAGTCAGTGTGGAAAGGATGTGTTGACAGATGTCATTGGAGTTATCACCAAAGTTGGTCTAATTGAAGAGAAGAGAACTATTGGAGGCAATGTTGATACCTTGATACTTCACTTACAACACATAAGGGGAAATATGGTTAAAGTGACAATATGGGATGAATATGTAAAGCTATTTGAGCTGAAATTGAAAGAAAATGTGTTTAAAGATCCTCAAGTCAATGTTGCAATTTTCACATCAATTGTAATTAAAGAATTTCGAGGTGAATTGTCAATTTACACATCAAGATCAACAAATATTTATGTCAACATAGACATACCAAAATCTAATGAGCTCATACAATCATTCAAGCTGCGTTTGGAGCTTGATGTGAAAGATTCTACAGATTCTACCATATTTGTTCTGTTTCATGAAGTTGCTGAACAATTAACACAATTGAACTTAGGCGACCATGCCACAACCTTTGAAAATGAAAATGGTGATAATTTGAACCTGCCACCCCAACTCCTAAAAATCATAGGTACTAGCCATGTCTTCCAAATAAAAATGAGCACCTATTTTGAAAGCTATGGAAGGCGTAGTTTCACAGCAAATAAATTTCTCAAGCCAGTTGTTAAGATTGAGGACGAAGATACGACAGACACCTCATGTGCCAAATCAAAGAAAAATACATTGGAAAAGACTGCTTCTTCCTCAAATGCATCTTCAGATACAAGAAAAACAAATTCACCACAAAAGAGGAGAAAGTTAAGGTTGCAGTCAGATGATGAAGAATCATAA 879 0.3504 MSHFCARTIVKQAGCDESIIPHHVFEFVNLDDLQSQCGKDVLTDVIGVITKVGLIEEKRTIGGNVDTLILHLQHIRGNMVKVTIWDEYVKLFELKLKENVFKDPQVNVAIFTSIVIKEFRGELSIYTSRSTNIYVNIDIPKSNELIQSFKLRLELDVKDSTDSTIFVLFHEVAEQLTQLNLGDHATTFENENGDNLNLPPQLLKIIGTSHVFQIKMSTYFESYGRRSFTANKFLKPVVKIEDEDTTDTSCAKSKKNTLEKTASSSNASSDTRKTNSPQKRRKLRLQSDDEES. 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00448 292 Gene3D - 20 155 IPR012340 -
Seca4g00448 292 MobiDBLite consensus disorder prediction 245 292 - -
Seca4g00448 292 SUPERFAMILY Nucleic acid-binding proteins 25 150 IPR012340 -
Seca4g00448 292 MobiDBLite consensus disorder prediction 255 273 - -
Seca4g00448 292 CDD RPA1_DBD_B_like 44 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00448 Seca-Chr4 7311670 7313652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00448 16 149 Core DNA Replication Machinery Family AT2G06510 29.286 1.75e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00448 - - mtr:120580096 151.369