Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00427 ATGGTGGGCCTTATGAACAGGGGATGTGATGGACTTGGGCCACGAGAACTGGATGATCAAGTTAATAATATAAAGGCTGAAGTTGCGAGTCTATATGCTGAGGAATGCAAACTTGACGATTGTATAAGGGAAAAGCAGGAGCTTCTAAGAAGCCTGGAGAAGACAGAAAACTCTCAAAAGTATGAACTTCTGACAACTTGTCTCATATTTGAGTTGCGATTTCTTACTGTTTCATTACGTGATAATGAGCTTCCTTGA 258 0.407 MVGLMNRGCDGLGPRELDDQVNNIKAEVASLYAEECKLDDCIREKQELLRSLEKTENSQKYELLTTCLIFELRFLTVSLRDNELP. 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00427 85 Coils Coil 38 58 - -
Seca4g00427 85 Gene3D - 15 76 - -
Seca4g00427 85 SUPERFAMILY E2F-DP heterodimerization region 19 66 IPR037241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00427 Seca-Chr4 6974430 6975649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00427 7 65 E2F-DP Transcription Factor Family AT1G47870 47.458 7.00e-14 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00427 K06620 - gmx:100811650 101.293