Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00420 ATGGCTCCCTCTAAGCCTCTAGTTGCATCCCTTCTGTTATCTTTTCTCCTTCTCCATCTCCATCTCCTTGATGCTGCTGATCAAACGATATCGCAGGTACAAGCACAGGCTCAGGGTTCTCTTCAGAAGATAGATTGTGATGGAGCATGTGCTGCTCGATGCCGTTTAGCATCTCGTCAGCGACTCTGCCACAGAGCGTGTGGAACTTGCTGCAGACGCTGCAACTGTGTGCCACCTGGCACTGCCGGCAACCAAGAAGTGTGTCCCTGCTATGCTAGCCTCACCACCCATGGTGGCAGACGCAAGTGCCCTTAG 315 0.5333 MAPSKPLVASLLLSFLLLHLHLLDAADQTISQVQAQAQGSLQKIDCDGACAARCRLASRQRLCHRACGTCCRRCNCVPPGTAGNQEVCPCYASLTTHGGRRKCP. 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00420 104 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 10 104 - -
Seca4g00420 104 Pfam Gibberellin regulated protein 45 104 IPR003854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00420 Seca-Chr4 6918494 6919477 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00420 - - gmx:100790448 155.606
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00420 4 6918494 6919477 Seca4g00420 4 6918494 6919477 ECH
Seca4g00420 4 6918494 6919477 Seca4g00420 4 6918494 6919477 PCT