Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00398 ATGAGAGGGCTCAATAGAGTGATATTTGTAAGCAGAGCCTTAAGAGGCAGCTCCACCGCCGTTGGCAGCTTTCACCGAGTGGCTCCCTATGGGACTTCTAACCTTCACAATCTTGTTGATCATTCAACTCCCTCTGTTGTTGCTCGCAGTGTCACAGTCACAGGGTTTAGGTATTTTAGTTCTGCTGCTGCAACGTCTCTCGCTCAAGACCTCCAGGCGAAGGGCTTCAATCCCAAAGAGGTTGTTCTCTTTCAGTATGAGGCTTGTCCATTCTGCAACAAGGTTAAAGCATTCATGGACTATTATGATATTCCATACAAAGTGGTGGAAGTAAATCCGATCAACAAGAAGGAGATCAAATGGTCTGACTACAGGAAGGTGCCTATTGTGACAGTTGATGGTGAACAAATGGTTGATTCTTCAGACATAATTGATAAGTTGGTGAAAAGGATACATCCAGATTATGACCTAAATGCAGATGAAGAGAAGAAGTGGCGTGAGTATGTTGGTTATTATCCTTTGCTATTTATTTCTTCTAGTTTATTTGGACCACTCGATTGCTTACCACTAGCTCTCTTATTTGGTCAAAATATGGTTGTGCCACTGCTTCCATCATTAGTAACCTTGATTTATCACATGAACATTATGCTGTGA 654 0.4205 MRGLNRVIFVSRALRGSSTAVGSFHRVAPYGTSNLHNLVDHSTPSVVARSVTVTGFRYFSSAAATSLAQDLQAKGFNPKEVVLFQYEACPFCNKVKAFMDYYDIPYKVVEVNPINKKEIKWSDYRKVPIVTVDGEQMVDSSDIIDKLVKRIHPDYDLNADEEKKWREYVGYYPLLFISSSLFGPLDCLPLALLFGQNMVVPLLPSLVTLIYHMNIML. 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00398 217 PANTHER MICROSOMAL PROSTAGLANDIN E SYNTHASE-2 31 169 - -
Seca4g00398 217 SUPERFAMILY Thioredoxin-like 80 160 IPR036249 -
Seca4g00398 217 ProSiteProfiles Glutaredoxin domain profile. 69 165 - -
Seca4g00398 217 Pfam Glutathione S-transferase, N-terminal domain 83 149 IPR004045 -
Seca4g00398 217 Gene3D Glutaredoxin 69 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00398 Seca-Chr4 6600734 6603762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00398 89 163 Glutathione S-transferase Gene Family AT5G16710 37.662 1.04e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00398 K05309 - gmx:100804696 236.884