Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00392 ATGAAGCTACTTTCTCCTCCTCCAACAATGTATATCTTGCTGCTCCGTTTCATACTATTGTTAGTTGTTTCTTGCAAAACGAAGGCTTTGATGGAACTTCCACCAAATGTTTCGGTTCCAGCAGTGATAGTGTTTGGTGATTCAATCATGGATACGGGCAACAACAACAACAACTTGAAAACGCTTGCTAGATGCAATTTCCCTCCATATGGCAAAGATTTCAAGGGAGGAGTCCCAACTGGTCGATTTGGCAATGGAAAGGTTCCATCAGATTTTATAGTGGAAGAATTGGGTATCAAGGAACTTCTGCCAGCATATTTGGATCAAAATATCCAACCTAGCGATCTCGTCACTGGTGTTTGCTTTGCATCCGGTGGTGCTGGCTATGATCCTCTCACATCCGAAATAGCGGTAAACCCGCATACTTATTACCAGTCAGCTATATCGTTGTCCGGTCAAATAGATTTGTTCAGAGAATACATAAGGAAGCTAGAAATGCTCGTTGGAGAGAATAGAACAAACTTCATCCTAGCCAATAGTATTTTTCTTGTGGTATCAGGCAGCAATGACATTTCCAACACATACTTTTTGAGTCACGCTAGAGAAGTGCAATATGATATTCCTTCTTACACTGACCTAATGGTTAGGTCAGCTTCGAATTTCTTAAAGGAAATTTATCAACTGGGTGCACGGAGGATAGGAGTATTCAGTGCTCCACCAATTGGGTGTGTACCATTTCAGAGGACAATAGTTGGAGGAATAGTGAGAGAATGTGCAGAAAAATACAACGATGCATCCAAGTTATTTAACAGCAAACTGTCAAAGGAGCTGGCTTCCCTTAATCGCAACTTGCCCAATGCCAGGATGCTTTACCTTGATGTTTACAACCCTCTACTTGACATCATTGTGAATTACCAAAAATATGGTTATAAAGTGGGAGACAAAGGATGTTGTGGCACAGGCGAAGTAGAGGCCGCAGTGTTATGCAACCCTTTGTCTCCTCCGTGTCTCGATGTTGAGGACTATGTTTTTTGGGACAGTTTTCATCCTTCGGAAAGTTGTTACAAGAAGCTCGTTCATCCTATTCTTCAAAAATATATGTACCAATTCTTCTAG 1116 0.414 MKLLSPPPTMYILLLRFILLLVVSCKTKALMELPPNVSVPAVIVFGDSIMDTGNNNNNLKTLARCNFPPYGKDFKGGVPTGRFGNGKVPSDFIVEELGIKELLPAYLDQNIQPSDLVTGVCFASGGAGYDPLTSEIAVNPHTYYQSAISLSGQIDLFREYIRKLEMLVGENRTNFILANSIFLVVSGSNDISNTYFLSHAREVQYDIPSYTDLMVRSASNFLKEIYQLGARRIGVFSAPPIGCVPFQRTIVGGIVRECAEKYNDASKLFNSKLSKELASLNRNLPNARMLYLDVYNPLLDIIVNYQKYGYKVGDKGCCGTGEVEAAVLCNPLSPPCLDVEDYVFWDSFHPSESCYKKLVHPILQKYMYQFF. 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00392 371 Gene3D SGNH hydrolase 33 367 IPR036514 -
Seca4g00392 371 Pfam GDSL-like Lipase/Acylhydrolase 42 361 IPR001087 GO:0016788
Seca4g00392 371 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 42 53 IPR008265 GO:0006629|GO:0016298
Seca4g00392 371 PANTHER GDSL ESTERASE/LIPASE EXL3 21 360 - -
Seca4g00392 371 FunFam GDSL esterase/lipase APG 31 367 - -
Seca4g00392 371 CDD SGNH_plant_lipase_like 40 366 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00392 Seca-Chr4 6497926 6503705 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00392 36 364 Pollen Coat Proteome AT1G75910 40.060 1.34e-76 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00392 - - gmx:100793604 609.757