Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00391 ATGGCTCTCCGTAGCGCTTCTTCAACAACTAGCTTAATGCTCCATTTCATATTGTTGTTCGTTTTATCAAACAGAACGAAGGCAGTGGTGAAACTACCACCAAACATTACAATTCCTGCAGTGATAGGCTTCGGAGATTCAATCGTGGACCCTGGCAACAACAACAAGATCAAAACACTTGTGAAGTGTAATTTCCCTCCTTATGGTCAAGATTTTGAGGGAGGGATCCCAACCGGTCGATTTTGCAACGGAAAAATTCCATCAGACCTACTAGTTGAAGAATTGGGTATCAAGGAGTATTTACCAGCTTATTTGGATCCAAATCTCAAATCAAGCGACCTTCTCACCGGAGTCTGCTTTGCTTCTGGAGCCTCCGGATACGATCCTTTAACGCCAAAAATAGCGTCAGTGATATCATTGTCCGAACAACTAGACATGTTCAAAGAATACATAGGGAAGCTTAAAAATATGGTTGGAGAGGACAGAACAAACTACATCCTAGCCAACAGTCTTTTCATTATAGTAGCTGGAAGTGACGACATTGCCAACACCTATTTTATTGCTCGCGTTAGACAATTACAGTATGATGTTCCTGCTTACACTGACCTTATGCTCAACTCAGCCTCTGATTTTGTAAAGGAATTATATGAACTTGGAGCACGAAGAATCGGAGTACTGAGTGCACCGCCAATTGGGTGCGTGCCATCGCAGAGGACTCTGGCTGGAGGCATTCAAAGAGAGTGCGCAGAGAAATACAATTACGCAGCCAAGTTATTTAATTCCAAATTATCAAAGGAACTTGATTCTCTTAACTCTAACTTGCCTAATAGTAGAATTGTGTACATTGACGTTTACAACCCCTTACTTGATATTATTGTCAACTACCAAAAATATGGGTATAAAGTTGTGGATAGAGGTTGTTGTGGCACAGGCAAAATAGAGGTTTCAGTGTTATGCAACCCTTTGGATGCCACTTGTCCCAATCCTTCGGAATATGTTTTTTGGGATAGTTATCATCCTACCGAAGGAGTATACAGAATGATCATAAACCAAGTCCTTCAAAAATATTTGAATCGATTGATATGA 1086 0.4079 MALRSASSTTSLMLHFILLFVLSNRTKAVVKLPPNITIPAVIGFGDSIVDPGNNNKIKTLVKCNFPPYGQDFEGGIPTGRFCNGKIPSDLLVEELGIKEYLPAYLDPNLKSSDLLTGVCFASGASGYDPLTPKIASVISLSEQLDMFKEYIGKLKNMVGEDRTNYILANSLFIIVAGSDDIANTYFIARVRQLQYDVPAYTDLMLNSASDFVKELYELGARRIGVLSAPPIGCVPSQRTLAGGIQRECAEKYNYAAKLFNSKLSKELDSLNSNLPNSRIVYIDVYNPLLDIIVNYQKYGYKVVDRGCCGTGKIEVSVLCNPLDATCPNPSEYVFWDSYHPTEGVYRMIINQVLQKYLNRLI. 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00391 361 CDD SGNH_plant_lipase_like 39 356 IPR035669 -
Seca4g00391 361 FunFam GDSL esterase/lipase APG 30 357 - -
Seca4g00391 361 Gene3D SGNH hydrolase 32 357 IPR036514 -
Seca4g00391 361 PANTHER GDSL ESTERASE/LIPASE EXL3 20 352 - -
Seca4g00391 361 Pfam GDSL-like Lipase/Acylhydrolase 43 350 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00391 Seca-Chr4 6435311 6440161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00391 35 360 Pollen Coat Proteome AT1G75910 39.210 4.70e-77 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00391 - - gmx:100793078 641.343