Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00390 ATGAGCAAACGCAAACGCAAACACAAAATGGAAATGTCCATGATTGCTGTGGTCTTTCTGTGGTGTGTCGTGTGTCTCCCTCTTTTTTACACAGCAGAGGCTCTAGTTACTCTGCCAGGGAATGAAACAATCCCAGCACTCATTATGTTTGGCGATTCTATTGTTGACACAGGGAGTAACAATGACCTTACCACGCTCGCTAAGTGCAATTTCCCTCCTTACGGCAGGGATTTCCCAGGCGGGAAACCAACGGGGAGATTCTCCAATGGCAAGGTTCCTTCCGACTTCTTGGCGGAAGCATTGGGAATCAAAGGATTCATACCATCATATATGAGTTCTAGTTTGCAGCCAGATGATCTCCTTACAGGTGTCAACTTCGCTTCGGGTGGCTCAGGATATGATCCTTTGACCCCAAAAATTCAGTCAGTTATACCATTATCTGACCAACTGAGGCTATTCAAAGAGTATATAGAAAAGCTTAAAGGAAATTTTGGTGAAGAAAGAACCAACTTTATCCTATCCAAAAGTTTAGTAATTGTGGTAGCGAGCAGCAACGACATTGCCAATTCTTATTTCGCAACTGGAATTAGGAAAATGCAATATGATGTTCCCTCTTATGATGATATGTTGGTGCAAGTAGCCTCTTCTTTCATTGAGGAATTATACGCATTGGGGCCAAGAAGAATAGGGGTGTTTGGTGCACCACCACTGGGATGTGTGCCATTTGAGCGAACGCTGTTTGGAGGTATCGAGAGAAAGTGCTCAGAAGAAGTAAACATGGCATCAAAGTTGTTTAATGCTAAATTATCTGCTGAGCTGGACTCCCTAAATCAAAATCTGCCTCAAGCGAAAATTGTCTATATCGATGTTTACAACCCTTTGCTCCATATAATCGAAAATCCCACCAAATATGGTACAATTAATTATATATAA 933 0.4202 MSKRKRKHKMEMSMIAVVFLWCVVCLPLFYTAEALVTLPGNETIPALIMFGDSIVDTGSNNDLTTLAKCNFPPYGRDFPGGKPTGRFSNGKVPSDFLAEALGIKGFIPSYMSSSLQPDDLLTGVNFASGGSGYDPLTPKIQSVIPLSDQLRLFKEYIEKLKGNFGEERTNFILSKSLVIVVASSNDIANSYFATGIRKMQYDVPSYDDMLVQVASSFIEELYALGPRRIGVFGAPPLGCVPFERTLFGGIERKCSEEVNMASKLFNAKLSAELDSLNQNLPQAKIVYIDVYNPLLHIIENPTKYGTINYI. 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00390 310 Coils Coil 266 286 - -
Seca4g00390 310 Gene3D SGNH hydrolase 36 309 IPR036514 -
Seca4g00390 310 CDD SGNH_plant_lipase_like 45 305 IPR035669 -
Seca4g00390 310 Pfam GDSL-like Lipase/Acylhydrolase 48 297 IPR001087 GO:0016788
Seca4g00390 310 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 47 58 IPR008265 GO:0006629|GO:0016298
Seca4g00390 310 PANTHER GDSL ESTERASE/LIPASE EXL3 21 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00390 Seca-Chr4 6404503 6407511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00390 41 308 Pollen Coat Proteome AT1G75910 42.804 1.19e-66 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00390 - - gmx:112997680 435.647