Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00385 ATGGCATCACCATCGCCACCATGTCCATGTAATTGCCGGAGTCATGTAACAAACACACCAACACCCTCTCCATCTCCTTCTTCCTCAGTTCCCAAAATCCCATCCAACCGAAATTCCATTGAACAAGTCTGGAAGGACATAAATCTTGCCACTCTTTGTAATTGCTCCACCGACACAGAAGCAGCTCCCCCTTCTACCTTTCTCAACGTCTTAGGACCCTTAAACAATGACTCATCCACAATCTTATTATCGGCTGCTGATTCTTCTTTATTTCAGAAGCAAGCTCCATCAACTAATAATTCCCTGAAACAGGGTCTGCAGGACTACTCTCTTCTTCTTTCATTGGACACTTCGAAATCTTCTTCTACCAATTTGTGCTCCTCTGATCAACGGCTTAAGCGTCTGATGAAAAATCGAGAATCTGCTGCACGGTCCAGAGCTCGGAAACAGGAAATTCTCTTTCTCCATTTTCTTCATCTTCTCATTAATGGTGAAAGCTTCTTCTTGTTTGTTAACTCCCAGAAAAAAAAAAAAAAATTTCTGCAGGCTTATAATTACGAGATGGAATTAAAACTTGCTCGTTTAGTGGAAGAGAATTCTAGACTCACAAGACAGTTGCAATTGCAGTTGTGCCTGCAGAAGTCATCTGCTAAGCCGTCCAAAATGCGCACTCTGTATAGAACCTCAACATGTCCGTTTTGA 702 0.4217 MASPSPPCPCNCRSHVTNTPTPSPSPSSSVPKIPSNRNSIEQVWKDINLATLCNCSTDTEAAPPSTFLNVLGPLNNDSSTILLSAADSSLFQKQAPSTNNSLKQGLQDYSLLLSLDTSKSSSTNLCSSDQRLKRLMKNRESAARSRARKQEILFLHFLHLLINGESFFLFVNSQKKKKKFLQAYNYEMELKLARLVEENSRLTRQLQLQLCLQKSSAKPSKMRTLYRTSTCPF. 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00385 233 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 133 148 IPR004827 GO:0003700|GO:0006355
Seca4g00385 233 Coils Coil 185 205 - -
Seca4g00385 233 Gene3D - 129 153 - -
Seca4g00385 233 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 34 232 IPR043452 GO:0003700|GO:0045893
Seca4g00385 233 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00385 Seca-Chr4 6294283 6295528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00385 129 233 bZIP Transcription Factor Family AT3G56850 38.095 4.50e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00385 K14432 - lja:Lj1g3v2216450.1 83.1889