Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00383 ATGGCCTCATCACCATCCTCCTCTTCTTCACTTCCATCCAACGTTGAACAAGTCTGGCAGGACATAAAACTTTCCTCTCTTTCTAATTCCTCCATCTCCATCGATATGAATTCCCCACCAGAAATTGCCTTTCACAAAGACAACATATCCACTCACAATGCCTGCAAATCTCAACAAACTCTGCTCACTCTCACTTCTATGTCTCTCTTTCACAAACAGAGCCATCACTCTTTCCTTCCTTCCTTTAACACTTCTTTATCCTTCGATGTTCTGGAATCTTCCACAATACGCCCCCTTGATGGCGAGAAAATGTCTCAGCAACATATCTATGCCTCCTCTGATCAAAGACATAAGCGCATGATCAAGAATCGAGAATCTGCTCTTCGCTCCAGAGCCAGAAAACAGGAAACCCTCTTTCTCCATTCTCTGTTTGGAATGTGTTAA 444 0.4324 MASSPSSSSSLPSNVEQVWQDIKLSSLSNSSISIDMNSPPEIAFHKDNISTHNACKSQQTLLTLTSMSLFHKQSHHSFLPSFNTSLSFDVLESSTIRPLDGEKMSQQHIYASSDQRHKRMIKNRESALRSRARKQETLFLHSLFGMC. 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00383 147 Gene3D - 114 138 - -
Seca4g00383 147 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 14 135 IPR043452 GO:0003700|GO:0045893
Seca4g00383 147 SUPERFAMILY Leucine zipper domain 116 137 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00383 Seca-Chr4 6244571 6245014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00383 64 136 bZIP Transcription Factor Family AT4G35900 50.685 7.93e-11 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00383 K14432 - lja:Lj1g3v2216450.1 83.1889