Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00362 ATGGAGTTTGATATTATACATCAAGCTCGATCTTTTTGGACAAATTATGGTGGAATGGTTGGTTTTGATATAAGACAATTGTATGCGAATAAGAGTAAAGTGGACCAGCGTGTGAATAGCTTGCGACTTGTGTGTGCAAAGGAGGGTCATCGAAGACAAGATATATAA 168 0.375 MEFDIIHQARSFWTNYGGMVGFDIRQLYANKSKVDQRVNSLRLVCAKEGHRRQDI. 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00362 55 Pfam FAR1 DNA-binding domain 11 54 IPR004330 -
Seca4g00362 55 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00362 Seca-Chr4 5952432 5952599 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g00362 FAR1 6.5e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00362 - - adu:107484096 83.5741