Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00286 ATGTTCATTTTTTCAACCATGCTTATCATTGGGCTGTGTGTCTGTCTTGTAGTCTCAAGGTTGCATGCTAGTGCTGAAGAAATCAAACAACATCCCAGAAGTGAAGTATTGATGGAGGACTCTAATTTCGGTTCAAGGAATGTGACACATGAAGATACTAATTTAGAGGAATCGGATAGAGTATCACGTGGAAATGAAGAAAGGGTTAATAATGGGGGAGCCACCATTCCCACAAATGATGGTGAGGAGGACGATTCTAATGAGAACTCCATTGAAGATGATGGTGTGGATGTTTACAAGATTGATAATGAAATGGATTTGAAGAAAGTTCCGTTTTATAGTTTAGGCGAAGATGAACTGAAGATGTATCATTTCAAGTGTCTTGGTGTGGCATTTGAATTCTACAATTCTTATGCAGAGAAGAGGGGATTTGCTGCTAGAAAGTGGAATAAGAAGCATTTGAAGAGACTTAACCGCAAGAGGGAACCTAGAGCGATGACGAGGTGTGGTTGTGAAGCTTTTTTTCGGGTACGTTTTTTTTCAGACACTGGTCGGTGGCATGTTAAAGCTTTTTCTGATGATCACAATCATGAGTTGTTAGGACAACAATTTGTTGGAATGCTACCTGCACATAGGAAGATGGATGAATGTGACTTATTGCAAATGAATAGCATGAGAGATGCTGGTATTGGTGTGACACAAATTTATGGTTTAGGTGCTAATCAATCAGGGGGGTATGAGAGGATGACATTTAGGAAGAGAGATATGTATAATGAAATTGAAAAACAGAGGCGCATGCAAGTTAGTGATGTGAGAGGTGCATTTTCATATCTAAGAGAGTTGAAATCACGGGAATCAGAAATGTTTTGGAGACACACTGTTGATGCAGAAGGAAGACTTGAACATCTGTTTTGGTGTGATGGAAGGAGTCAAGCAGATTATAGTGTTTTTGGCGATGTTGTTGCATTTGATTCAACATATCGGCGCAATAAATACATGTCTCCTTTGGTTGTGTTTGCTGGAGTGAACCATCATAACCAAACAATTGTCTTTGGTAGTGCCTTAATCGCAAATGAAACAGAAGAGACTTATGTGTGGTTACTTAGGAAATTCATTGTATCAATGAAGGGAAAGATACCAAGCTCAGTGATCACTGATGGAGACCTTGCAATGAGGAATGTTATAAGGTCCGAGTTTCCAAATGCCCATCATAGATTGTGTGCTTGGCATCTGTTAAGGAATGCAACTAGAAATGTTAATAATCCAAGGTTCACTTCTAAATTTAGACGTTGTATGCTTGGTGATTATGATGTTGGTAGGTTTCGCTCCAAATGGGAAGAACTGGTTAATGAGTTTCATTTACAGTCGAATGAATGGGTAAGAGAACTATATGATAAAAGGAAAATGTGGGCAACAACACACATCCGTGGTAACTTCTTTGCTGGTTTTCGCACAACGTCTAGGTGTGAGGGGATGCACTCTCAAGTTGGGAGGTATGTCCATTATCGTAATAACTTGACAGAGTTTTTGAAACATTTTTCCCGATACTTGGCTTACACTAGACAGCGAGAAATGGAGGCTGATTTTGAATCTATCATTGGTGAGCCTGTTTTGCAAACATCTTTTGAAGGTATTGAGCGGTCTGCTGCAAAGTTTTATACAAGGAAGTTGTTTTTCTTATTCAGGCCTGTGTTGGAAAGGGCTAGTGGAGTTAAGGTGACTGCATGTGAGCAAACCTCTAATTGCTTGATTTATATTGTGACCTATAAGAGGATGGAGTCCATGGGAATTCCTTGTGAACACATAGTTATATTGTTGCATTATCTAGAGATAAATGAATTGCCCGAGTCCCTTATATTACAAAGATGGACAAAGAATGCAAAGCAATGTGTTGGTGAGACTACTGCTATGGGGTCGGTATGGCGTTCTAATGTTATGAGTTTGTTGTTTGAATGTTATGAAGTTTGCAACTTGGCGGGCAGAAGTGACCCTAACCTAGATCTAACCAAGCAAACAATTAGGGAACTGTTGCAAAAGTTAAGGCAATCTTCCATACCTTCTAGAGGACAAGCAGCGAATGGAAATGATGGGCAAGATGACGAAGGCAACGTGAGGGATCCAGCACGTGCGAGGACCAAAGGTTGTGGAACTCGACAAATGGCTACTGGTGTTAGGGGTAATAGGAGAACAACATGTTGTAGTATCTGTCAGGGTCCTAGACACAACAAGAAGACTTGTCCTCTTCAAAGGCCTGAAGGCAATGATGTCACATCCACCATTAGGGAAGATGAGTAG 2295 0.4039 MFIFSTMLIIGLCVCLVVSRLHASAEEIKQHPRSEVLMEDSNFGSRNVTHEDTNLEESDRVSRGNEERVNNGGATIPTNDGEEDDSNENSIEDDGVDVYKIDNEMDLKKVPFYSLGEDELKMYHFKCLGVAFEFYNSYAEKRGFAARKWNKKHLKRLNRKREPRAMTRCGCEAFFRVRFFSDTGRWHVKAFSDDHNHELLGQQFVGMLPAHRKMDECDLLQMNSMRDAGIGVTQIYGLGANQSGGYERMTFRKRDMYNEIEKQRRMQVSDVRGAFSYLRELKSRESEMFWRHTVDAEGRLEHLFWCDGRSQADYSVFGDVVAFDSTYRRNKYMSPLVVFAGVNHHNQTIVFGSALIANETEETYVWLLRKFIVSMKGKIPSSVITDGDLAMRNVIRSEFPNAHHRLCAWHLLRNATRNVNNPRFTSKFRRCMLGDYDVGRFRSKWEELVNEFHLQSNEWVRELYDKRKMWATTHIRGNFFAGFRTTSRCEGMHSQVGRYVHYRNNLTEFLKHFSRYLAYTRQREMEADFESIIGEPVLQTSFEGIERSAAKFYTRKLFFLFRPVLERASGVKVTACEQTSNCLIYIVTYKRMESMGIPCEHIVILLHYLEINELPESLILQRWTKNAKQCVGETTAMGSVWRSNVMSLLFECYEVCNLAGRSDPNLDLTKQTIRELLQKLRQSSIPSRGQAANGNDGQDDEGNVRDPARARTKGCGTRQMATGVRGNRRTTCCSICQGPRHNKKTCPLQRPEGNDVTSTIREDE. 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00286 764 MobiDBLite consensus disorder prediction 683 697 - -
Seca4g00286 764 MobiDBLite consensus disorder prediction 744 764 - -
Seca4g00286 764 MobiDBLite consensus disorder prediction 683 721 - -
Seca4g00286 764 MobiDBLite consensus disorder prediction 50 66 - -
Seca4g00286 764 Pfam MULE transposase domain 320 414 IPR018289 -
Seca4g00286 764 Pfam FAR1 DNA-binding domain 153 200 IPR004330 -
Seca4g00286 764 MobiDBLite consensus disorder prediction 39 93 - -
Seca4g00286 764 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 125 681 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00286 Seca-Chr4 4609362 4613315 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g00286 MULE 7.3e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00286 - - tpra:123913749 647.121