Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00285 ATGGCTAATCGTTATGATTTTATCAAAGATGTTAATGCTGCTTCTTATCACAAAATTTGGAGAATCAAAGCTAGAGTGATTCGGCTTTGGAGATCTACTAATTTTAGAGATTCCACCCATAAACCTATGATTGTATTGGATGAAGAGGGAAATCGTATCCAGTGCACTGTGAAGAGCATTCATGTCTATTTGTTTGAGGGTGTGGTTTTGGAAGGTAATGTTTACATGTTAGAAAACGTTTCTGTTGCACTAAATACTGCAAAGTTCAAACCAACAATGCATGAATTTAGACTGTATTTCAAGAGAGAAACACAAGTTCATTTGATTGACGATTCCAACATTCCAATGAATGGGTTTTCATTTATCCCATTTTCTGATATTTTGAACAATCATTTGTCGTCCATCAGTTTTTAA 414 0.343 MANRYDFIKDVNAASYHKIWRIKARVIRLWRSTNFRDSTHKPMIVLDEEGNRIQCTVKSIHVYLFEGVVLEGNVYMLENVSVALNTAKFKPTMHEFRLYFKRETQVHLIDDSNIPMNGFSFIPFSDILNNHLSSISF. 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00285 137 SUPERFAMILY Nucleic acid-binding proteins 8 111 IPR012340 -
Seca4g00285 137 Gene3D - 7 112 IPR012340 -
Seca4g00285 137 Pfam Domain of unknown function DUF223 43 131 IPR003871 -
Seca4g00285 137 CDD RPA1_DBD_A_like 21 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00285 Seca-Chr4 4606234 4606758 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00285 16 135 Core DNA Replication Machinery Family AT2G06510 27.778 3.63e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00285 - - aip:107647757 157.532