Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00279 ATGGAAGGGGATATCAGTTTGGATGGAGATGCTGCAAGTCTTCAACCAGTTGTAGATCGTGACAGCAAGCAAGATTCAAAGACAAGCAAGGCCAAAGATGAAACCACCAAAACAGTACCCTTATACAAGCTTTTCTCATTTGCTGATCCTTTGGATCATTTATTGATGTTTGTGGGGACTGTGCGTTCTATTGGGAGTGGAATCTCCATGCCCTTGATGACTTTAATATTGGAAAATATGATCAATGCATTTGGAGAATCCACAAACGCCAAAGAAGTTGTTGATGAAGTTTCCAAGGTAATTCCTTACAAATTTAATCCCTTTTAA 327 0.3914 MEGDISLDGDAASLQPVVDRDSKQDSKTSKAKDETTKTVPLYKLFSFADPLDHLLMFVGTVRSIGSGISMPLMTLILENMINAFGESTNAKEVVDEVSKVIPYKFNPF. 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00279 108 MobiDBLite consensus disorder prediction 1 34 - -
Seca4g00279 108 MobiDBLite consensus disorder prediction 20 34 - -
Seca4g00279 108 Gene3D ABC transporter type 1, transmembrane domain 35 107 IPR036640 GO:0005524|GO:0016020
Seca4g00279 108 PANTHER ABC TRANSPORTER B FAMILY 19 90 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00279 Seca-Chr4 4513842 4514168 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00279 32 103 Calmodulin-binding Proteins AT2G36910 35.616 9.97e-09 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00279 K05658 - lja:Lj4g3v2227840.1 155.992