Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00071 ATGGGTTCTGAGGTGGGTGATGTTTCCACCGCCAGTAAATGGCTGGGTTTCGTGGCGGCCGTTTGGATTCAAGCAATCTCCGGCAACAACTACACATTCTCCAATTACTCCGATGCTTTGAAATCCCTAATGCATCTCACTCAGATTCAGCTCAATAATCTCTCCGTAGCCAAAGATGTTGGCAAGGCTTTTGGGCTTCTTGCTGGCCTTGCCTCTGACCGATTCCCAACTTGGGCTATTCTTCTCATCGGCTCCATCGAAGGCCTCATCGGCAATGGAGTTCAATGGCTCGTCGTTAGCCACAGGATTCAACCCCTTCCCTACTGGCAGATGTGTATCTTTCTCTGCATGGGTGGCAACTCCACAACCTGGATGAACACCGCCGTTTTGGTCACTTGCATGCGCAATTTCCGGCGAAATAGAGGCCCTGTTTCCGGCATTCTCAAAGGCTATGTCGGGTTAAGCACCGCCATATTCACCGACCTTTGCTCTGCTCTCTTCGCCGACGACCCTGCTTCCTTCCTCATCATGCTCTCTGTAGTTCCATTCGCCGTTTGCCTCACCGGTGTCTTTTTCCTCCGTGAGGTTCCTCCGGCTGATTCCACCGCCGCGCAAGACAAGGAAGAGTCTAGGTATTTCGGCCTTTTCAATGCCGTCGCCGTCGTCGTTGCCGTTTACCTCTTGGTTTACGGCTTCGTGCCCAACCCCTCCACTTTGGTGTCTAGGGTTTTCGCCGTGGTTTTGCTCCTTCTGTTGGCGGCGCCGTTGGGAATACCGGTCTACTCATACTTCAAAGCCCGGTTCAAACCGGGTCTGGATATCGAGGGAAGGGTGAATGAACCGTTGATTCGCAGTCAAGATGAGGGAAATGAAATGGAGGCAGATAACAGAGTAAACAAAGAGACGGAGGTGATAAGGAGGGGACCGGTGGTAGGGGAGGAGCATACCATAGTGGAGGCGCTGAAAACCTTGGATTTTTGGATATTGTTTGTGTCTTTTCTGTGTGGGGTTGGAACGGGTTTGGCAGTTATGAACAATATGGGCCAGATTGGGTTGGCCCTGGGTTACTCAGATGTGTCCATCTTTGTATCTTTGACCAGTATTTGGGGCTTTTTCGGTCGGATCATTTCGGGTTCGGTTTCAGAGTACTTCATCAAGAAAGCTGCAACTCCTAGACCTCTTTGGAATGCAGCTTCTCAAATTGTGATGGCTGTGGGGTACATACTCCTGGCCTTGGCTATGCCTGGTTCCCTTTACATAGGCTCTACCATAGTTGGTATATGCTATGGAGTCCGGCTTGCCATTACTGTCCCAACAGCATCTGAGTTATTTGGCCTCAAATATTATGGTCTCATATACAACATTCTCATCCTTAACCTTCCCTTAGGCTCTTTCCTCTTTTCTGGTCTGCTTGCTGGCATACTGTATGATATGGAGGCAACTACCACTGCAGGAGGAGGCAACACTTGCATTGGAGCTCATTGTTACAGGCTAGTGTTCATAATCATGACTGCAGCTTGTATTGTTGGGTTCTTGTTAGACATTCTATTATCAATCAGAACAAAGAATGTTTACCACAAGATTTCCTTGAGCAAAAAAACCAAGAAATCCTCACAGACATCAAGTAGTCGATGA 1635 0.4887 MGSEVGDVSTASKWLGFVAAVWIQAISGNNYTFSNYSDALKSLMHLTQIQLNNLSVAKDVGKAFGLLAGLASDRFPTWAILLIGSIEGLIGNGVQWLVVSHRIQPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPASFLIMLSVVPFAVCLTGVFFLREVPPADSTAAQDKEESRYFGLFNAVAVVVAVYLLVYGFVPNPSTLVSRVFAVVLLLLLAAPLGIPVYSYFKARFKPGLDIEGRVNEPLIRSQDEGNEMEADNRVNKETEVIRRGPVVGEEHTIVEALKTLDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYSDVSIFVSLTSIWGFFGRIISGSVSEYFIKKAATPRPLWNAASQIVMAVGYILLALAMPGSLYIGSTIVGICYGVRLAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATTTAGGGNTCIGAHCYRLVFIIMTAACIVGFLLDILLSIRTKNVYHKISLSKKTKKSSQTSSSR. 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00071 544 SUPERFAMILY MFS general substrate transporter 16 523 IPR036259 -
Seca4g00071 544 CDD MFS_Mch1p_like 12 510 - -
Seca4g00071 544 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 526 - -
Seca4g00071 544 Pfam Nodulin-like 13 260 IPR010658 -
Seca4g00071 544 Gene3D MFS general substrate transporter like domains 319 524 IPR036259 -
Seca4g00071 544 Gene3D MFS general substrate transporter like domains 11 205 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00071 Seca-Chr4 1118347 1121014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00071 11 537 Nodulin-like Gene Family AT4G34950 71.091 0.0 800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00071 - - gmx:100813607 809.675