Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00036 ATGAAAATACCGAGCAGCCCAACAAAGAAGCAGTCTGTTGGCGATCCAAAGACACACATGATCTCACCCTCCCGCTCCCGCCACTTGTTTCGATCTTCAAAAAATCTGCGAAGAAGGAAAACCGCCGCTCGTTCTTCTTGGAACCACCACATCGACCAATATGACATTTCCTCCTCCAATAGTAATAGTCCATACTACAAAGGCCTCACTGATCAATCCCTTGCTATCTTGGATGATGGTCCTACCCCTACCGCTCTTCATTCTCACAACCACACTAATTACCTCCTCTCATCTGGCCATAGCCCTTACTACAAAGGTCTTACCGATTATTCCCTTGCTATTGGCCCTCCCACCCCTCCTCATCTTCACAATTACCATCCTTCTTCCGATTCTAGCCCTAGCCCTTACTACAGGGGTCTCATTGATTACTCCCTTGCTCTTCATCCACCTTCATCTCCTGCTACTAACTCCCACTCTTCTATCTTCTCCATCAACTTCTACACCCGCTTTTACATCAAAGGTCGGGAAGAAGAAGAAGGCGAAGAACTCACTGCTCCTCCGTCATCATCCATCCATGCTGATCATGTTGCCTTTCTAATTGAACAGAACAACAACACTCTGTCTGAAGAAGAAAGTAAGATGGAGTTGATTGTTGAAGAGGAGAAGCCTTTGAGGGAGACAGAATCAGATCAAGCAATCAAGGTAATTGAGAGTGTATTAGAAGAAAATGCAAAGAAAACAGTTTTGGAGGAGGAGATGGAATTGTTGCCTAGCGATGATGTTGAGTTGGTGATCATTCAAGAGAAGCCATTGAGGGAGAGAGTATCAGAAGAAAGTAATACAGAGAAAACATTAATTGTGGAGGAGTTGGATATTCAAGGGAATAAGGAGGAACTCACTTCTGAAAAGGAGAAGTCCACTGTCTTGTCAGTTTCTGAACAAACAGTTGAATCAGAATTAGGAAATCACAAGTTGAAGGAGAAGAAGGACACAGTTGAGGAAGGAAATGTGTACAAGGAGTATGTATGGGCAACCAAATACCAACCTGTTACCTTGGAAGACTTCATCTGCAACAGAGATAAAGCCCTTCAGCTTAAAGCATTGGTAAAAGATGGGTGTGCCTGTAATCATTTTATATTTGAAGGGCCACCAAATTCTGGAAAGAGATCCATGATACGGGCTATGCTTCGAGAGGTGTTTGGGGCTGACAGAGTGCAGGTCACAGAAGAATATAAAAACTTCAACTTGAAGGTAATGCGCATCAGTCCATCTATTACGTGTTCTCTTTTCATCAATTTCTTAACAGATTGA 1311 0.4325 MKIPSSPTKKQSVGDPKTHMISPSRSRHLFRSSKNLRRRKTAARSSWNHHIDQYDISSSNSNSPYYKGLTDQSLAILDDGPTPTALHSHNHTNYLLSSGHSPYYKGLTDYSLAIGPPTPPHLHNYHPSSDSSPSPYYRGLIDYSLALHPPSSPATNSHSSIFSINFYTRFYIKGREEEEGEELTAPPSSSIHADHVAFLIEQNNNTLSEEESKMELIVEEEKPLRETESDQAIKVIESVLEENAKKTVLEEEMELLPSDDVELVIIQEKPLRERVSEESNTEKTLIVEELDIQGNKEELTSEKEKSTVLSVSEQTVESELGNHKLKEKKDTVEEGNVYKEYVWATKYQPVTLEDFICNRDKALQLKALVKDGCACNHFIFEGPPNSGKRSMIRAMLREVFGADRVQVTEEYKNFNLKVMRISPSITCSLFINFLTD. 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00036 436 Gene3D - 341 430 IPR027417 -
Seca4g00036 436 Coils Coil 200 220 - -
Seca4g00036 436 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 343 406 - -
Seca4g00036 436 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 342 403 IPR027417 -
Seca4g00036 436 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00036 Seca-Chr4 623213 625219 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00036 342 416 Core DNA Replication Machinery Family AT5G27740 36.000 5.55e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00036 K10756 - gmx:102664389 237.654