Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00035 ATGCAAGAGTTGTTGTTTATTTTGTATGGATCAATTAATCAAGTTAGTGACATGTTTACCTATTTTATTTATCTGAAAGCGATCATTTTGTATGAGGCTGAGAAGCTATCGATAGAATCCTTGTTGTATATTAAGTGGCTACTAGAAAAGTATAAAGGGTGTAGTAAGGTATTCTTTTGTTGCTCTGATGAATCAAAGCTCCAACCTGTCAAATCACTTTGCATCACCTTCCGCCTTTCATCTCCATCAACCGAAGAGATTGCTAAGATGTTGGAATATATTGGAAAAGGAGAAGGAATAAAATTATCACGCGACGTAGTTGAAAAGATAACTTTGAGGTCCAAAAACAATCTCCGCCAAGCCATTCGTTCATTGGAGGCCACCTGCCGAAACAAGGATATCCTTAGAGACGACGATTTAATTTTAACTGGATGGGAGGATGATATTTTGAATATTGCTAAAAGTATAATCGAAGAGCAAAGTCCAAGACGTCTTCGCCTGCTAGACCTCTCATACAACAACTTTGTTGGGATGATTCCCAAGTGTTTTGCAGCATTGAGTAGTAGCACTCTCAGGATTTTAAATTTTGGTGGAAACAAGCTCCAAGGTTATATTCTTGATACTTTTCCAACTTCATGTGCACTAAGGTTGTACGTCATTCGTAGAAAGCTCCGATGTCTTATGATTCATGATGTTCCTCCTGACTTTATTTACAAGTCTTTGGTTGCAGCGTTAACGAGTTTAGTTGATGACTCACTACAGTCAGGGGTTGCCAAACTCGACAAGGAGTACAACAAAACTACTGAGATCAAATTTGAAACGCTGAAGCAGTTCGGTCATGCTCAAAACAAAGCATTAAACTACTTAAAAGTTGAAGAATTTATAGCGAAATTCATGAGCTGGTACAAGAACACGTCTAAAAAAAATAATCATGTGCAACTTATTGTTGGAACACAGACAAGTGGTTGTTCTTGA 975 0.3764 MQELLFILYGSINQVSDMFTYFIYLKAIILYEAEKLSIESLLYIKWLLEKYKGCSKVFFCCSDESKLQPVKSLCITFRLSSPSTEEIAKMLEYIGKGEGIKLSRDVVEKITLRSKNNLRQAIRSLEATCRNKDILRDDDLILTGWEDDILNIAKSIIEEQSPRRLRLLDLSYNNFVGMIPKCFAALSSSTLRILNFGGNKLQGYILDTFPTSCALRLYVIRRKLRCLMIHDVPPDFIYKSLVAALTSLVDDSLQSGVAKLDKEYNKTTEIKFETLKQFGHAQNKALNYLKVEEFIAKFMSWYKNTSKKNNHVQLIVGTQTSGCS. 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00035 324 Gene3D Ribonuclease Inhibitor 164 209 IPR032675 -
Seca4g00035 324 Gene3D - 83 142 - -
Seca4g00035 324 SUPERFAMILY L domain-like 125 216 - -
Seca4g00035 324 CDD HLD_clamp_RFC 82 140 - -
Seca4g00035 324 Gene3D - 214 302 - -
Seca4g00035 324 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 19 164 - -
Seca4g00035 324 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 127 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00035 Seca-Chr4 610818 621266 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00035 26 304 Core DNA Replication Machinery Family AT5G27740 27.305 3.39e-24 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00035 K10756 - gmx:102664389 348.591