Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00011 ATGAAGCGTCACAACACAAAGCCAACCCCGACATCTCCGTCTCAAATCCCCTTCGCATCATTCTTTTTTTATTTTCAGTGTTGGCTGTCTGTCACTCAGATTCAATTCCACTTCTTCTTCCTATACGGGAAAAAAATGGAGGACTCGAAGGAAAACCATCTGGCTCCGCTTCCTCCCATACCCTCTTCAAATGTTCAAGGCGGTTCAAGAATGGGGGATGTCAGTCTCAAGCTCGGGAAGGAGATGACACACCATCACCGGCTGCCTCTCAGCAACATCAATCACAATATTATGAAATGTACAGCGCAGACAGTTCAGCACTACCATAAAGAAACAAAGAACCAGAACCTATTGGTCCCAACTCCCGGTTACCGGTTAGATTGTGCTATCATAGATACCGATGAATACGAGGATGACAGTGGTAATGCAGTTCCAGCATTTGTGAAGCACACGGAAGCAATGCTAGACGAAATTGACAGAATAGAGGAAGTTGAAATGGAAGATGTGGAGGAACCTGTTATGGACATCGACGCCTGTGACAGGAATGATCCACTTGCAGTTGTTGAGTACATAGATGATATCTACCGTTTCTACAGGAAAACTGAGAAATCCAGCTGTGTCCCTCCAAATTACATGACCTGTCAGTTTGACATTAATGAGAAGATGAGGGCCATTCTTATTGACTGGCTTATTGAGGTTCACTACAAATTTGAGCTTTTGGAGGAGACATTATTCCTTACTGTCAATCTCATAGACAGGTTCTTGGAGCGTCAGGCAGTAATCAGAAAGAAGCTTCAATTGGTTGGTGTAACAGCCATGCTTATAGCTTGTAAGTATGAGGAGGTATCAGTGCCTACCGTTGAGGATTTTATTCTGATAACAGGCAAGGCATACACACGAAATGAAGTTTTAAATATGGAGAAGTTAATGGTGAATATCTTGCAATTCAAGTTGTCTGTGCCTACTCCATACGTATTCATGAGAAGATTTCTTAAGGCGGCAGCTCATTCCGACAAAAAGGTGAGTAATGTAACATTGTTTTGCAAATATAAACTCTAA 1059 0.424 MKRHNTKPTPTSPSQIPFASFFFYFQCWLSVTQIQFHFFFLYGKKMEDSKENHLAPLPPIPSSNVQGGSRMGDVSLKLGKEMTHHHRLPLSNINHNIMKCTAQTVQHYHKETKNQNLLVPTPGYRLDCAIIDTDEYEDDSGNAVPAFVKHTEAMLDEIDRIEEVEMEDVEEPVMDIDACDRNDPLAVVEYIDDIYRFYRKTEKSSCVPPNYMTCQFDINEKMRAILIDWLIEVHYKFELLEETLFLTVNLIDRFLERQAVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITGKAYTRNEVLNMEKLMVNILQFKLSVPTPYVFMRRFLKAAAHSDKKVSNVTLFCKYKL. 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00011 352 Pfam Cyclin, N-terminal domain 193 319 IPR006671 -
Seca4g00011 352 ProSitePatterns Cyclins signature. 223 254 IPR006671 -
Seca4g00011 352 CDD CYCLIN_AtCycB-like_rpt1 174 316 - -
Seca4g00011 352 SUPERFAMILY Cyclin-like 182 318 IPR036915 -
Seca4g00011 352 SMART cyclin_7 228 312 IPR013763 -
Seca4g00011 352 PANTHER CYCLINS 145 331 IPR039361 -
Seca4g00011 352 FunFam G2/mitotic-specific cyclin 207 319 - -
Seca4g00011 352 Gene3D - 193 344 - -
Seca4g00011 352 Gene3D - 207 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00011 Seca-Chr4 240734 243821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00011 46 348 Core Cell Cycle Gene Families AT1G76310 52.408 1.21e-101 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00011 K21777 - gmx:100812029 392.504