Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11951 ATGGTATGCAATTTGCACCCTAATTTGAATTCATCACCTTTGATTATTAATAACAATGTTCGTCCATCTATAGATCCATCGGAAGACCCTACAAGTATCCTCCACGGGAGGCAATCCTGTTCGAGCCGGGTAGGACCTCTATGGGCGGCAAAGCTCTCCCTCCGAGTATTTAACACAGCTGCATACCCAGGGCTCGAACTCGAGACCACTGATTTGCACCCTAATTTGAATTCATTACCTTCGATTGTTAATAACAATGTTCGTCCATCTATAGATCCAGCGGAAGACCCTGCAATAAGGAAGAGAGAAATCTTCCGTTTTGTGTGTCTGTGGACTGAGAAAAGCAGCGGAAGGAAGCTAGAGCCAAATTCGGATTCTTCACGAGAACCAACCCGACCGGGTTCAGGGGGTGACTTGCCCCAAGGAGGTGAGTACAACCCTTATCCTGTAGCACGGAGGGTGAATTCGATCCATTCTATAATGATGGATGATGATATGGAGAGCGGTACCTTGGGGTCTTACCAGGACAGGCCAAGAACATTCCCCAACATGCGTAGTAAAGCTTACACCCCACTGATATTTCGTATTCTACTGGGTATAAATGTTCGTGTCCTGTTCATTCTTTTGTTCCTGGGGTTTGGAGCTATCTTTTACATGGGAGCAAGTACATCTCCAATTATTGTGTTTGTCATCTCTATTTGTATTCTCAGCTTCCTTGTTTCAATATATCTTACAAAGTGGGTGCTCGCAAAAGATGAGGGCCCCCCTGAAATGGTTCAGGTAATTGTTGGCTTTGGGGCTCATCGTATTGGAGAAGATGAACAGTTTAGTCAGATTGCTTTTTGGATTAATTGTGAGATATCTGATGCTATACGAGATGGAGCTGAAGGATTTATCAGGACCCAGTATGGGAGTATATCCAAGATGGCGATGTTGCTTGCTCTTGTCATTCTTTGCATATATTTGTTTCGCAGCACAACTCCTCAACAGGAATCTTCTGGCATGGGAAGGTCAACATCTGCATACATCACTGTAGCTGCTTTCCTTTTAGGTGCCCTTTGTTCAGGTATTGCTGGATATATAGGGATGTGGGTGTCAGTTCGTGCCAATGTCAGAGTCTCTAGTGCTGCAAGACGGTCTGCAAGAGAGGCATTGCAGGTAGCTACTCGTGCAGGTGGTTTATCTGCTATCACTGTTGTTGGTATGGCTGTAATTGGTATAGCAGTCCTTTATGCCACATTTTATGTTTGGTTGGGAGTGGACTCACCAGTGCCTCTTCTTCTAGTTGGATATGGATTTGGTGCCTCCTTTGTGGCACTGTTTGCCCAGTTGGGTGGTGGAATATACACTAAAGCAGCTGATGTTGGGGCAGACCTCGTTGGAAAAGTAGAACAGGGAATACCTGAAGATGACCCAAGGAATCCTGCTGTTATTGCTGATTTGGTTGGAGACAATGTGGGTGATTGTGCTGCTAGAGGTGCTGATCTTTTTGAAAGCATTGCAGCTGAAATAATCAGTGCCATGATACTTGGAGGAACAATGGCACAACGCTATCCATCTGGCTTCATCTTGTTTCCTCTTGTTGTTCACTCATTTGATCTGGTAGTTTCATCGGTTGGGATATTTTCTATTAGGGGTACACGTGAATCTGGAGTAATGGCTCCTATGGAGGATCCGATGACAATTCTTCAGAAAGGATATTCTGTTACAATAGTTTTAGCTGTTCTGGCATTTGGTCTGTCTACCCGGTGGTTACTTTATGTTGAGCAAGCACCTTCAGCATGGTTCAATTTTGCTTTGTGTGGGTTGGTTGGTATTATCACAGCTTACATTTTTGTCTGGATCACCAAGTATTATACTGACTACAAGCACGAGCCTGTGCGCATATTAGCCCTTTCTAGCTCTACGGGCCATGGGACCAACATAATTGCCGGAGTCAGTTTGGGCCTGGAATCTACTGCTCTTCCTGTCCTTGTGATCAGTGTATCGATTGTCTCAGCTTTCTGGCTGGGCCACACCTCTGGACTATTAGATGAAACAGGAAACCCAACTGGTGGGCTGTTTGGCACAGCTGTGGCAACAATGGGAATGCTTAGCACGGCTGCCTATATTCTTACCATGGATATGTTTGGCCCAATTGCTGATAATGCTGGAGGAATTGTAGAGATGAGCCAGCAGCCTGAAAGTGTCCGAGAGATCACTGATGTCCTTGATGCTGTGGGAAATACAACCAAAGCCACCACTAAAGGATTTGCCATTGGTTCTGCTGCTCTTGCATCTTTCCTTTTGTTTAGCGCTTACATGGATGAGGTTTCTACATTCGCTCATGAACCTTTTAAACAGGTTGATATTGCAATTCCAGAAGTTTTCGTTGGTGGGTTGCTGGGTTCTATGCTTATATTTGTCTTTAGTGCTTGGGCCTGTGCTGCTGTTGGCCGAACTGCACAAGAGGTTGTCAATGAAGTAAGAAGGCAGTTCATTGAGAGGCCTGGTATTATGGATTACAAGGAGAAACCAGATTATGGTCGCTGTGTTGCTATTGTAGCATCTGCATCATTACGAGAGATGATAAAACCTGGTGCTTTGGCAATCATTTCACCTATTGTAATTGGTTTTCTGTTCCGAATTTTGGGCTACTACACGGGGCACCCCTTACTCGGGGCTAAAGTTGTGGCAGCTTTGCTGATGTTTGCAACAGTGTCTGGTATTCTTATGGCGCTTTTTCTGAACACGGCTGGTGGTGCCTGGGATAATGCAAAGAAGTACATAGAGACTGGAGCGCTTGGAGGAAAAGGAAGTGATGCTCACAAAGCAGCAGTAACAGGAGACACGGTAGGAGATCCATTCAAAGACACCGCTGGGCCTTCACTTCATGTCCTTATAAAGATGCTCTCAACGATTACGCTGGTAATGGCTCCAATCTTCCTGTCAACATCTGCATACATCACTGTAGCTGCTTTCCTTTTAGGTGCCCTTTGTTCAGGTATTGCTGGATATATAGGGATGTGGGTGTCAGTTCGTGCCAATGTCAGAGTCTCTAGTGCTGCAAGACGGTCTGCAAGAGAGGCATTGCAGGTAGCTACTCGTGCAGGTGGTTTATCTGCTATCACTGTTGTTGGTATGGCTGTAATTGGTATAGCAGTCCTTTATGCCACATTTTATGTTTGGTTGGGAGTGGACTCACCAGTGCCTCTTCTTCTAGTTGGATATGGATTTGGTGCCTCCTTTGTGGCACTGTTTGCCCAGTTGGGTGGTGGAATATACACTAAAGCAGCTGATGTTGGGGCAGACCTCGTTGGAAAAGTAGAACAGGGAATACCTGAAGATGACCCAAGGAATCCTGCTGTTATTGCTGATTTGGTTGGAGACAATGTGGGTGATTGTGCTGCTAGAGGTGCTGATCTTTTTGAAAGCATTGCAGCTGAAATAATCAGTGCCATGATACTTGGAGGAACAATGGCACAACGCTATCCATCTGGCTTCATCTTGTTTCCTCTTGTTGTTCACTCATTTGATCTGGTAGTTTCATCGGTTGGGATATTTTCTATTAGGGGTACACGTGAATCTGGAGTAATGGCTCCTATGGAGGATCCGATGACAATTCTTCAGAAAGGATATTCTGTTACAATAGTTTTAGCTGTTCTGGCATTTGGTCTGTCTACCCGGTGGTTACTTTATGTTGAGCAAGCACCTTCAGCATGGTTCAATTTTGCTTTGTGTGGGTTGGTTGGTATTATCACAGCTTACATTTTTGTCTGGATCACCAAGTATTATACTGACTACAAGCACGAGCCTGTGCGCATATTAGCCCTTTCTAGCTCTACGGGCCATGGGACCAACATAATTGCCGGAGTCAGTTTGGGCCTGGAATCTACTGCTCTTCCTGTCCTTGTGATCAGTGTATCGATTGTCTCAGCTTTCTGGCTGGGCCACACCTCTGGACTATTAGATGAAACAGGAAACCCAACTGGTGGGCTGTTTGGCACAGCTGTGGCAACAATGGGAATGCTTAGCACGGCTGCCTATATTCTTACCATGGATATGTTTGGCCCAATTGCTGATAATGCTGGAGGAATTGTAGAGATGAGCCAGCAGCCTGAAAGTGTCCGAGAGATCACTGATGTCCTTGATGCTGTGGGAAATACAACCAAAGCCACCACTAAAGGATTTGCCATTGGTTCTGCTGCTCTTGCATCTTTCCTTTTGTTTAGCGCTTACATGGATGAGGTTTCTACATTCGCTCATGAACCTTTTAAACAGGTTGATATTGCAATTCCAGAAGTTTTCGTTGGTGGGTTGCTGGGTTCTATGCTTATATTTGTCTTTAGTGCTTGGGCCTGTGCTGCTGTTGGCCGAACTGCACAAGAGGTTGTCAATGAAGTAAGAAGGCAGTTCATTGAGAGGCCTGGTATTATGGATTACAAGGAGAAACCAGATTATGGTCGCTGTGTTGCTATTGTAGCATCTGCATCATTACGAGAGATGATAAAACCTGGTGCTTTGGCAATCATTTCACCTATTGTAATTGGTTTTCTGTTCCGAATTTTGGGCTACTACACGGGGCACCCCTTACTCGGGGCTAAAGTTGTGGCAGCTTTGCTGATGTTTGCAACAGTGTCTGGTATTCTTATGGCGCTTTTTCTGAACACGGCTGGTGGTGCCTGGGATAATGCAAAGAAGTACATAGAGACTGGAGCGCTTGGAGGAAAAGGAAGTGATGCTCACAAAGCAGCAGTAACAGGAGACACGGTAGGAGATCCATTCAAAGACACCGCTGGGCCTTCACTTCATGTCCTTATAAAGATGCTCTCAACGATTACGCTGGTAATGGCTCCAATCTTCCTGTGA 4848 0.4534 MVCNLHPNLNSSPLIINNNVRPSIDPSEDPTSILHGRQSCSSRVGPLWAAKLSLRVFNTAAYPGLELETTDLHPNLNSLPSIVNNNVRPSIDPAEDPAIRKREIFRFVCLWTEKSSGRKLEPNSDSSREPTRPGSGGDLPQGGEYNPYPVARRVNSIHSIMMDDDMESGTLGSYQDRPRTFPNMRSKAYTPLIFRILLGINVRVLFILLFLGFGAIFYMGASTSPIIVFVISICILSFLVSIYLTKWVLAKDEGPPEMVQVIVGFGAHRIGEDEQFSQIAFWINCEISDAIRDGAEGFIRTQYGSISKMAMLLALVILCIYLFRSTTPQQESSGMGRSTSAYITVAAFLLGALCSGIAGYIGMWVSVRANVRVSSAARRSAREALQVATRAGGLSAITVVGMAVIGIAVLYATFYVWLGVDSPVPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRYPSGFILFPLVVHSFDLVVSSVGIFSIRGTRESGVMAPMEDPMTILQKGYSVTIVLAVLAFGLSTRWLLYVEQAPSAWFNFALCGLVGIITAYIFVWITKYYTDYKHEPVRILALSSSTGHGTNIIAGVSLGLESTALPVLVISVSIVSAFWLGHTSGLLDETGNPTGGLFGTAVATMGMLSTAAYILTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSTFAHEPFKQVDIAIPEVFVGGLLGSMLIFVFSAWACAAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYGRCVAIVASASLREMIKPGALAIISPIVIGFLFRILGYYTGHPLLGAKVVAALLMFATVSGILMALFLNTAGGAWDNAKKYIETGALGGKGSDAHKAAVTGDTVGDPFKDTAGPSLHVLIKMLSTITLVMAPIFLSTSAYITVAAFLLGALCSGIAGYIGMWVSVRANVRVSSAARRSAREALQVATRAGGLSAITVVGMAVIGIAVLYATFYVWLGVDSPVPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRYPSGFILFPLVVHSFDLVVSSVGIFSIRGTRESGVMAPMEDPMTILQKGYSVTIVLAVLAFGLSTRWLLYVEQAPSAWFNFALCGLVGIITAYIFVWITKYYTDYKHEPVRILALSSSTGHGTNIIAGVSLGLESTALPVLVISVSIVSAFWLGHTSGLLDETGNPTGGLFGTAVATMGMLSTAAYILTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSTFAHEPFKQVDIAIPEVFVGGLLGSMLIFVFSAWACAAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYGRCVAIVASASLREMIKPGALAIISPIVIGFLFRILGYYTGHPLLGAKVVAALLMFATVSGILMALFLNTAGGAWDNAKKYIETGALGGKGSDAHKAAVTGDTVGDPFKDTAGPSLHVLIKMLSTITLVMAPIFL. 1616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11951 1615 MobiDBLite consensus disorder prediction 117 147 - -
Seca3g11951 1615 NCBIfam V-type H(+)-translocating pyrophosphatase 229 979 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca3g11951 1615 NCBIfam V-type H(+)-translocating pyrophosphatase 982 1614 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca3g11951 1615 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 967 1615 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca3g11951 1615 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 224 976 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca3g11951 1615 Pfam Inorganic H+ pyrophosphatase 977 1610 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca3g11951 1615 Pfam Inorganic H+ pyrophosphatase 236 971 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca3g11951 1615 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 230 975 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11951 Seca-Chr3 267855786 267882368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11951 160 976 Primary Pumps ATPases AT1G16780 82.971 0.0 1393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11951 K23025 - gmx:100787805 1381.7