Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11949 ATGGATTCAAAGAAATCTAACAAGATCAGAGAGATTGTTAGGCTTCAACAAATCCTCAAGAAGTGGAAGAAGGTTGCAAATGCTTCAAAGAACACCACTACTAGCAGTGGCAGTAAAGGCATCAAGTTCTTAAAACGAACCCTTTCATTCACAGATGCTTCATCCAATAATGACATCGTTCCAAAAGGGTTCCTTGCTGTTTGTGTTGGGAAAGAGCTCAAGAGATTCATTATTCCAACAGATTACTTGAGACACCAAGCATTTGAGATGTTACTGCGAGAAGCCGAAGAGGAATTTGGTTTCCAGCAAGAGGGTGTGCTCAAAATTCCATGCCAAGTATCAGTGTTTGAGAAGATATTGAAGGTGGTGGAAGATAAAAAAGAAGGCTTGCATCATGAGTTTGGGTTCAGTGCATCAGATTGTGAAGTTACTCCCACTCATCATGCTCAAGATATGGAGAGCACCATGTCCATGATGGTCGCATCCAAATTCCTCCGCCACAGTCTCCATCAAAACCGTGAAGTCTGGCATGGCCAAGAAGCTTATTGGAATCACAAACCTTCGAAACTGTGGCCCAACATATACAGCGATGTATCCTTTGGGAACCTTTGA 612 0.4248 MDSKKSNKIREIVRLQQILKKWKKVANASKNTTTSSGSKGIKFLKRTLSFTDASSNNDIVPKGFLAVCVGKELKRFIIPTDYLRHQAFEMLLREAEEEFGFQQEGVLKIPCQVSVFEKILKVVEDKKEGLHHEFGFSASDCEVTPTHHAQDMESTMSMMVASKFLRHSLHQNREVWHGQEAYWNHKPSKLWPNIYSDVSFGNL. 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11949 203 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 33 119 IPR003676 GO:0009733
Seca3g11949 203 Pfam Auxin responsive protein 20 122 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11949 Seca-Chr3 267833708 267835557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11949 1 151 Calmodulin-binding Proteins AT2G24400 55.932 8.67e-59 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11949 K14488 - gmx:100782489 234.572