Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11914 ATGGAAAGCAAGGAGAATCTTGAAGCCATCAGAACGTACTTGACCACTAGCTTGGAAACATCAATCGCTATTGCTTCTGCATTAGATGAGTCTGGATCAAGATTGGAGCTACTTAACCAGAGATGTCTCTCCTTGCAAGCTTCACTTAAACCCATCTCCATGCAGAAGTGTTCATTTGTTGACATTTGCCATGGTATAGACAGTGTTCTATGTTCTGCTACTGCTGTCCTCAAGGTTTTTGATTCCCTTCATCAGTTGGAGGATTCTCTCTTGACAGACCCCACTTCTGATCTATGCACATACATCTCAGACACAAAGAAACTAGAAGAAGCATTGAAGCTTCTCACTGATAATTGCAGGTTAGCAGTTGGCTGGTTGAAGAGTGTTTTTGAGTTCTTACAAGACAAAGCAATCACCAATGAGATTTACCTATTGAATATAAAGAAATCCTTGAGAATATTGCATGTCATAGAGGAAGGTGCTCGCCATGATGGAGGCCTTCTCAGTACTGCCTTTGACAAACTAGAGATTGTGTTCCACAGGCTTCTGATGGCAAACTCCATGCCTCTTCCTTTGGTTTCATTAACATCACACAATGGCCACCAAGGCAGCATCACCACACAATCTCTGCCACTGCCAGGTTCTTTAACAAGGAAGTTGCAGGCCATAGCTGAGAGATTAAATGCTAATAATAGGCTAGACAAGTGTCAATCTTTATATGTTGAAGTTCGAAGTATGAATGCTTGTCGAAGTTTGAAGACTTTGGATTTGAGTTACCTTGAGATTCCAACAGGTGAATTTGAGAGTGTGCAGGGTTTGGAGAGTTACATAGACCAATGGGGTAGCCATTTGGAGTTGGTTGTGAAACAACTGTTGGAGGTTGAGTACAGGCTTTCTACTAATGTCTTTGAGACAATTGGTCCAGAAGCATGGATGGGGTGTTTTGCAAAGATTGCCATTGAATCAGGAATTCTTTCTTTTATTCGATTTGGAAGGGTTGTTGCTGAGAGGAAAAATGACCCCTTCAAGTTGTTGAACTTGCTGTCCATATTCAAAGTCTTAAATGGCCTAAGACTAAAATTCAACCAGTTTTTCAGAGGGGAAGCTTGTGAAGAAATTAGGACTGTGACAAAGGATCTTATCAACAAAGTTGTCAATGGTGCCAGTGAGATATTCTGGCAACTTCCAGCACAAGTGAAGTTGCAAAGGCCAAGTTCTCCTCCCCCAGATGGCAGTGTTCCTAGGCTGGTAAGCTTTGTAACTGATTATTGCAATCAGCTGCTTGGAGATGCATATAGGCCACACTTGACACAGGTTTTGGAAATACATCTCAGTTGGAGAGAGGAAGCATATGAAGAGGGTGTTGTTTTCACCCAAATATATAACATCATCAAGGAAGTTGCTGTAAATTTGGATGCTTGGTCAAAGGCATATGAAGATATCACTTTGTCATACCTTTTTATGATGAATAATCACTGCCATTTCTACAATTTAAGGGGTACTGTGCTAGGGAATATGATGGGAGATTCTTGGTTAAGAGCACATGAGCAATATAAGGACTATTATGCAGCACTTTATTTGAAGAATAGTTGGGGAAATCTTCAACCTATTCTTGTAGTTCAAAAGGACATACTTTCATCCTCTGAGGGGAAAGTGACTACCCAAGATTTGGGTAGGAGACTAACCGCTTTCAATATAGCTTTTGAAGAAAAGTACAAAAAGCAATCTAATTGGGTAATCTCCGATGAGATCTTGAGGGAAAATGTGTGCAAGCATTTGGTGGAAGGTATTATTCCAATCTATAGGGCCTACTTGAAGAATTATATTTTGTCAATTGAAAATGATGCTAAGGTTGACAAGCACATTAAATATACAGTGCAGAGTTTGGAGAATAGGATTAGGTCTTTGTTTCAGCCCAAATTGAGGAAGCATGGTAGCATTAAAAAGGCAGATTTCATTAGTAAAATAAAAGAAGTGAGCCATCAGTTTCGCTTGACCCTAACTGCTTTATAG 2013 0.4014 MESKENLEAIRTYLTTSLETSIAIASALDESGSRLELLNQRCLSLQASLKPISMQKCSFVDICHGIDSVLCSATAVLKVFDSLHQLEDSLLTDPTSDLCTYISDTKKLEEALKLLTDNCRLAVGWLKSVFEFLQDKAITNEIYLLNIKKSLRILHVIEEGARHDGGLLSTAFDKLEIVFHRLLMANSMPLPLVSLTSHNGHQGSITTQSLPLPGSLTRKLQAIAERLNANNRLDKCQSLYVEVRSMNACRSLKTLDLSYLEIPTGEFESVQGLESYIDQWGSHLELVVKQLLEVEYRLSTNVFETIGPEAWMGCFAKIAIESGILSFIRFGRVVAERKNDPFKLLNLLSIFKVLNGLRLKFNQFFRGEACEEIRTVTKDLINKVVNGASEIFWQLPAQVKLQRPSSPPPDGSVPRLVSFVTDYCNQLLGDAYRPHLTQVLEIHLSWREEAYEEGVVFTQIYNIIKEVAVNLDAWSKAYEDITLSYLFMMNNHCHFYNLRGTVLGNMMGDSWLRAHEQYKDYYAALYLKNSWGNLQPILVVQKDILSSSEGKVTTQDLGRRLTAFNIAFEEKYKKQSNWVISDEILRENVCKHLVEGIIPIYRAYLKNYILSIENDAKVDKHIKYTVQSLENRIRSLFQPKLRKHGSIKKADFISKIKEVSHQFRLTLTAL. 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11914 670 PANTHER EXOCYST COMPLEX PROTEIN EXO70 72 637 IPR004140 GO:0000145|GO:0006887
Seca3g11914 670 Pfam Exo70 exocyst complex subunit 279 634 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca3g11914 670 Gene3D Exocyst complex component Exo70 133 644 - -
Seca3g11914 670 SUPERFAMILY Cullin repeat-like 76 637 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11914 Seca-Chr3 267567076 267569088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11914 5 657 EXO70 exocyst subunit family AT4G31540 48.649 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11914 K07195 - gmx:121175138 1063.14