Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11892 ATGGACAACCTGAGAGCTATTCTTCAAGCAATTCAGACACAGCCCTTTGCCACCTCGGTCGTGTTAGGTGGTTTGTCTCTCCTCGTTTTGCTCTTCCTCAAGCAGAGAGTCATAGGAGGACTCAGTCATTCTAAACTTCCCCGAGTACCAGCGGTTCCAGGGCTACCAGTGATAGGGAATCTGTTGCAATTGAAGGAGAGGAAACCTTACAAGACGTTCATGCAGTTCGCTGAGAAATATGGGCCCATTTATTCCATCAGAACCGGTGCTTACACTCTCATAGTTCTCAACTCCGTCCAAGTTGCCAAGGAGGCAATGGTGACACGATCTTCGTCCACTTCAACGAGAGTACTAACATATGCACTCAAGATTCTGACTTTTGATAAGTGCATGGTTGCTATGAGTGACTACAATGAATTTCACAAAAAGATCAAAAGGCATATTCTTACTAGCCTTCTCGGAGCCAATGCACAGAAGCGACACCGTTCCCACAGAGAAGCCATGATGGAAAATATTTCAAGGAAGCTCAATGAACATGTGAAGGCCTTTTCTTCTTCAGCTGTTAATTTTAGGAATATATTTGCATCTGAACTTTTTCAACTAGCACTAAAACAGGGTCTTGGAAATGATGTAGAATCCATTTATGTGGAGGAGTTTGGGAGTACTTTGTCAAGAGAGGACATATATAAGATTCTAGTGCTTGACATCATGGATGGTGCAATTGAGGTGGATTGGCGAGATTTCTTTCCATACTTGAAATGGGTTCCAAACAAGAGTCTAGAGATGAAAATCCAGAAAATGTACTTTCGTAGAAAAGCTGTGATGAAGGCTTTGATTAATGAGCAAAAGAAGCGAATAGCTTCAGGAAAGGAAGAAGATTGTTATATTGACTACCTGTTATCTGAAGCAAAAGAACTGACAGAAGAACAAGTTTCCATGCTGCTTTGGGAGAGCATTATTGAGTCATCAGATACTACATTAGTCACAACAGAGTGGGCTATGTATGAACTTGCTAAAGACAAAAATTGTCAGGACCGTCTCTATGAGGAGATAAAAAACGTGTGTGGATATGAAAAGGTTACTGAGGAAAAATTGTCTAAGCTACCATACTTGGGGGCTATCTTTCATGAAACTTTAAGGAAGCATAGTCCAGCTCCAATTGTCCCATTAAGATGTGTTCAAGAAGATACCCAATTGGGAGGATATCATATTCCTGCTGGAAGCCAGATTGCAATAAACATATATGGATGTAACATGGACAAGAACCAGTGGGAAAATCCCAACCAGTGGATGCCTGAGAGATTTCTTGATGAGAAATATGACTCCATGGATTTGTACAAGACCATGGCCTTTGGAGCAGGGAAAAGGGTGTGTGCTGGGTCTCTTCAAGCAATGCTGATAGCTTCCACAGCAATTGGAAGAATGGTTCAAGAATTTGAGTGGAAACTCAAAGAAGGGGAGGAAGTAGAGGATGTGGATACGGTAGGCCTTACCACCCACAGGCTCCATCCCCTGCAAGTGAAACTCAAGCCAAGAAATTAA 1542 0.4215 MDNLRAILQAIQTQPFATSVVLGGLSLLVLLFLKQRVIGGLSHSKLPRVPAVPGLPVIGNLLQLKERKPYKTFMQFAEKYGPIYSIRTGAYTLIVLNSVQVAKEAMVTRSSSTSTRVLTYALKILTFDKCMVAMSDYNEFHKKIKRHILTSLLGANAQKRHRSHREAMMENISRKLNEHVKAFSSSAVNFRNIFASELFQLALKQGLGNDVESIYVEEFGSTLSREDIYKILVLDIMDGAIEVDWRDFFPYLKWVPNKSLEMKIQKMYFRRKAVMKALINEQKKRIASGKEEDCYIDYLLSEAKELTEEQVSMLLWESIIESSDTTLVTTEWAMYELAKDKNCQDRLYEEIKNVCGYEKVTEEKLSKLPYLGAIFHETLRKHSPAPIVPLRCVQEDTQLGGYHIPAGSQIAINIYGCNMDKNQWENPNQWMPERFLDEKYDSMDLYKTMAFGAGKRVCAGSLQAMLIASTAIGRMVQEFEWKLKEGEEVEDVDTVGLTTHRLHPLQVKLKPRN. 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11892 513 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11892 513 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11892 513 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11892 513 FunFam Ent-kaurene oxidase 2 41 513 - -
Seca3g11892 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Seca3g11892 513 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11892 513 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11892 513 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11892 513 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11892 513 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11892 513 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11892 513 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11892 513 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 17 513 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Seca3g11892 513 CDD CYP77_89 79 506 - -
Seca3g11892 513 Gene3D Cytochrome P450 42 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11892 513 Pfam Cytochrome P450 51 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11892 513 SUPERFAMILY Cytochrome P450 42 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11892 Seca-Chr3 267378093 267380262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11892 44 512 Cytochrome P450 AT5G25900 64.468 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11892 K04122 - gmx:100802970 747.273