LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca3g11812	ATGGGTGAGGCTCTGCTTTCGGAGCTTGCGACGGAGATAGTGGTCCCGGTGTGCGCTGTCATCGGGATCGTCTTCTCGTTGGTTCAGTGGCTCCTGGTTTCGCGCGTCAAGCTCACGCCGGAGCGGCACGGAACGTCGTCGTCCCCGCGCAACAACAAGAACGGTTATGGTGACTACCTGATTGAGGAAGAAGAAGGTATCAACGACCACAGCGTCGTCGTCAAATGCGCTGATATACAGAGCGCCATCTCCGAAGGGGCAACGTCCTTTCTTTTCACTGAATATCAATATGTGGGGATCTTCATGGTTGCTTTTGCAATCTTGATCTTCCTTTTCCTGGGCTCTGTGGAAAGCTTCAGTACTAAGAGCCAGCCCTGCACATATGATAAGAGCAAGCTTTGCAAGCCAGCCCTTGCAACTGCATTGTTTAGCACTGTGTCTTTCTTGCTTGGTGCTATAACCTCAGTCCTGTCTGGTTTTCTTGGGATGAAAATTGCGACCTATGCCAATGCAAGGACAACCTTGGAAGCGAGAAAGGGAGTTGGAAAGGCTTTTATTACTGCATTTAGGTCTGGTGCAGTGATGGGTTTCCTTCTTGCAGCAAATGGTCTTTTGGTGCTCTACATTGCCATCAATCTCTTCAAGCTTTATTATGGTGATGATTGGGAGGGTCTTTTCGAGGCTATAACGGGTTATGGTTTGGGTGGATCTTCCATGGCCCTGTTTGGAAGAGTTGGTGGTGGTATATATACCAAGGCTGCTGATGTAGGTGCTGATCTAGTTGGGAAAGTTGAAAGAAACATCCCTGAGGACGATCCAAGAAACCCAGCTGTGATTGCTGACAATGTTGGTGATAATGTTGGAGATATTGCTGGGATGGGTTCTGATCTTTTTGGCTCATATGCTGAGTCATCCTGTGCTGCCCTGGTTGTTGCTTCCATTTCCTCATTTGGAATCAACCACGAGTTCACTGCTATGTTATATCCCCTACTTATCAGTTCTATGGGCATTCTTGTCTGTTTGATTACTACTCTTTTTGCAACTGATTTCTTTGAAATCAAGGTTGTCAAGGAAATTGAACCCGCATTGAAAAAGCAGCTTATCATCTCTACAGTACTCATGACTGTTGGAATTGCAATTATTACTTGGCTTGCTTTGCCATCATCATTCACAATTTTCAACTTTGGGGCTCAAAAGGAAGTAAAGAGCTGGCAGCTGTTCCTCTGTGTGGGTGTTGGTCTTTGGGCTGGACTTATTATTGGGTTTGTTACTGAATATTATACAAGCAATGCTTACAGCCCTGTACAAGATGTTGCTGATTCCTGCCGGACTGGAGCTGCAACTAATGTCATCTTCGGCCTTGCTCTGGGATACAAGTCCGTCATTATTCCCATTTTTGCCATTGCAATCAGCATTTTTGTGAGTTTTACTTTTGCTGCAATGTATGGTATCGCTGTGGCTGCCCTTGGGATGCTGAGCACCATTGCAACTGGATTGGCTATTGATGCCTATGGGCCTATCAGTGACAATGCGGGAGGTATTGCTGAGATGGCAGGCATGAGCCATCGGATCCGTGAGAGAACTGATGCCCTTGATGCTGCTGGAAACACTACTGCTGCCATTGGCAAGGGATTTGCAATTGGGTCTGCTGCACTAGTATCTTTGGCCCTGTTTGGTGCTTTTGTCAGCAGAGCAGGAATTTCAACTGTTGATGTCTTGACTCCCAAGGTCTTTATTGGACTCTTAGTTGGTGCCATGCTTCCTTACTGGTTTTCTGCCATGACCATGAAGAGTGTAGGAAGTGCAGCTTTGAAGATGGTTGAGGAGGTTCGTAGGCAGTTCAACACCATTCCAGGACTCATGGAGGGTACTGCCAAGCCTGATTATGCTACCTGCGTCAAGATTTCTACTGATGCATCCATCAAGGAGATGATTCCCCCAGGCGCCCTTGTCATGCTCACACCACTCATTGTTGGTATCTTATTTGGTGTGGAAACACTTTCAGGTGTTCTTGCAGGCTCTCTAGTTTCTGGTGTGCAGATCGCAATATCAGCATCCAACACTGGTGGTGCCTGGGACAATGCTAAGAAGTACATTGAGGCTGGTGCGTCTGAGCATGCTAGGACTTTGGGCCCAAAGGGATCTGACCCACACAAGGCAGCTGTTATTGGCGATACCATTGGAGACCCTCTTAAGGATACTTCAGGACCTTCACTCAACATCCTTATTAAGCTCATGGCGGTTGAGTCACTAGTCTTTGCTCCATTTTTCGCCACCCATGGCGGTAGCTCTTCAATTATGAGAACTGGAAATTTGTTTCACAAACAAGTTTTTGCCAAAATTAATTTTCAATTAATCAGCTTTGGACTTTTGGCTATTAATGTTTTGGTAAATTGGGAAGCATCTAAAGATGAGCAGGAAACCAATCAATACAAGTCTAGGTTCTCTCACCGTGGATTCACCTGGGTGGGAAGAGAAGGAAATAAAGCGGCTCACTTTATCGCTCAGTTAAGGGAAGAATCGGCTCTACCATCAAACTGGGTTGTTCAGCCTCCTCCTGGCCTTCGATCCATTTTGACACAAGACTCCATAGCTGGTTGTGCATCGAGATCGGCTTCTTCTTCTTACTCCCTTAGACAAACGGTGATATCAGAGGTTGTTCCTCCTTGA	2670	0.464	MGEALLSELATEIVVPVCAVIGIVFSLVQWLLVSRVKLTPERHGTSSSPRNNKNGYGDYLIEEEEGINDHSVVVKCADIQSAISEGATSFLFTEYQYVGIFMVAFAILIFLFLGSVESFSTKSQPCTYDKSKLCKPALATALFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKLYYGDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHEFTAMLYPLLISSMGILVCLITTLFATDFFEIKVVKEIEPALKKQLIISTVLMTVGIAIITWLALPSSFTIFNFGAQKEVKSWQLFLCVGVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFTFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGISTVDVLTPKVFIGLLVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGSSSIMRTGNLFHKQVFAKINFQLISFGLLAINVLVNWEASKDEQETNQYKSRFSHRGFTWVGREGNKAAHFIAQLREESALPSNWVVQPPPGLRSILTQDSIAGCASRSASSSYSLRQTVISEVVPP.	890

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca3g11812	889	Hamap	Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA].	9	758	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Seca3g11812	889	PANTHER	K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP	6	758	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Seca3g11812	889	PIRSF	H+-PPtase	8	767	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Seca3g11812	889	NCBIfam	V-type H(+)-translocating pyrophosphatase	10	762	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Seca3g11812	889	Pfam	Inorganic H+ pyrophosphatase	45	753	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca3g11812	Seca-Chr3	266468118	266475004	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca3g11812	4	631	Primary Pumps ATPases	AT1G15690	89.189	0.0	1137

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca3g11812	K23025		-	gmx:100803691	1427.92