Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11802 AGTCAATATTCATGCAGCAAAAGACGAGGGAAAGAACAACCAACATGGCGGGTGTTCTCTTTGAAGGAATTACTCTCTGCTACAAATAATTTCAACTATGATAACAAGCTTGGAGAAGGGGGCTTTGACAGTGTGTACTGGGGCCAACTGTGGGATGGATCGCAAATTGCAGTGAAAAGATTTAAAGTTTGGAGCAACAAAGCAGAGAGGGAATTTGCTGTTGAAGTTGAAATATTGGCAAGAGTACAGCACAGGAATCTTCTTGATCTACGTGGCTATTGTGCTGAAGGACAGGAACGGTTAATTGTATATGAATATATGCCAAATTTGAGCTTGCACTCTCATCTTCATGGACAACATTCAGCAGAATGTCTTCTTGATTGGAATCGGCGGATGGATATTGCAATCGGGTCTGCTGAGGGAATTGTGAGAGTACTAACCTGGCTTTGCTCATCATTGGCTTTTGTCATTATCATTACATATAGAGAATAG 492 0.4126 SQYSCSKRRGKEQPTWRVFSLKELLSATNNFNYDNKLGEGGFDSVYWGQLWDGSQIAVKRFKVWSNKAEREFAVEVEILARVQHRNLLDLRGYCAEGQERLIVYEYMPNLSLHSHLHGQHSAECLLDWNRRMDIAIGSAEGIVRVLTWLCSSLAFVIIITYRE. 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11802 163 PANTHER OS01G0253100 PROTEIN 12 142 - -
Seca3g11802 163 FunFam PTI1-like tyrosine-protein kinase At3g15890 3 106 - -
Seca3g11802 163 SUPERFAMILY Protein kinase-like (PK-like) 13 143 IPR011009 -
Seca3g11802 163 ProSiteProfiles Protein kinase domain profile. 31 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g11802 163 Gene3D Transferase(Phosphotransferase) domain 1 14 144 - -
Seca3g11802 163 Pfam Protein tyrosine and serine/threonine kinase 33 142 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11802 Seca-Chr3 266343423 266344522 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11802 19 142 Trihelix Transcription Factor Family AT1G70460 51.613 1.81e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Seca3g11802 PK_Tyr_Ser-Thr 2.9e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11802 - - cit:102620388 252.677