Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11793 ATGCCCAACGCGCTGCCGTTCCCTCTGGCTGACGAGGTCCCTGCTGATGGAATTCTGATCACGGGTCACTCTCTTGCAATTGATGAATCAAGCATGACGGGGGAGAGTAAAATTGTCCATAAGGATTCTAAAGATCGTTTCCTGATGTCTGGATGTAAAGTTGCGGATGGCAGTGGCACTATGCTGGTAATTTAG 195 0.4872 MPNALPFPLADEVPADGILITGHSLAIDESSMTGESKIVHKDSKDRFLMSGCKVADGSGTMLVI. 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11793 64 SUPERFAMILY Calcium ATPase, transduction domain A 10 64 IPR008250 -
Seca3g11793 64 Gene3D - 8 64 - -
Seca3g11793 64 Pfam E1-E2 ATPase 11 63 - -
Seca3g11793 64 PANTHER CATION TRANSPORTING ATPASE 11 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11793 Seca-Chr3 266282081 266283009 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11793 3 63 Primary Pumps ATPases AT3G21180 75.410 5.35e-27 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11793 K01537 - gmx:100792945 105.916