Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11784 ATGTTTCCTACGTTTTCATTTTGGTTATATCTTCTTTTTACTTTCAACTTTAACCCAAAAACAACTGCCTCCACATTAGGAAACCAAACTGACAATTTGGCATTGCTCAAATTCAAGGAATCAATATCCAATGACCCTTATGGAATCTTGGTTTCTTGGAATAATTCTATCCACTTCTGCAACTGGCATGGAATCAAATGCAACCCTATGCTTCAAAGAGTTACAGGGTTGAACCTAAAAGGGTATCAGTTGCATGGATCCATATCTCCCCATGTTGGTAATCTCTCTTTCTTGAGAAACCTCAACCTTGGAAACAATAGCTTCTTTGGAAAAATGCCACAGGAACTGGGTCGGTTGTTACAATTGCAGCAACTCATTCTCACCAATAACTCCTTGACAGGGGAGATTCCTACAAACTTGACAAGTTGCTCTAATCTCAAAGGCTTAGACTTGAGTGGAAATAATCTTATTGGCAAAATACCAATGGGAATTGGCTCTCTTCAGAAGCTTCAAATATTGAGGGCTACAGAAAACAATTTAACTGGAGGAGTGCCACCATTCATAGGGAATCTTTCATCTCTTACTCTTCTCTATTTGGCTGCTAATAACTTAGAGGGAGTTATTCCACAAGAAATATGTCACCTCAAAAACTTAACAACATTATATGTGCCTATCAACAAACTATCTGGTACATTTCCTTCTTGCTTTTACAATATGTCATCTCTTACTGCTATCTCAGTTGCAGCTAATGAATTTAATGGTTCTCTTCCACCTAACATGTTCAACACTCTCCACAATCTCCAAATCCTTTACATTGGTGGAAACCAAATCTTTGGTCCAATCCCCACTTCTCTTGCAAATGCTTCTGCCCTTACAGTACTTGATATTGCTGAAAGCCATTTCATGGGACAAGTTCCAAGTCTAGGGAAGTTGCAAGATCTTAGATGGTTAAATTTGTACATGAACAATTTAGGTGACAATTCAACTAAGGATCTAGAGTTTTTAAAATCATTGACAAATTGTAGTGAGTTGTATATGCTTGCTATATCAGACAATAATTTTGGAGGCCATTTACCAAATTCCTTAGGAAATTTGTCCACCAACCTCAATCAACTATATCTTGGGGGTAACCACATATCAGGAAAAATTCTTGAAGAATTAGGAAATCTAATTGGCTTAATTCTCCTGACCATGGAAAATAGTCTTTTTGAAGGGACAATTCCAAGTACTTTTGGGAAATTTCAAAAGATGCAAAAGTTAGAATTGAGTGAAAACAAACTGTCAGGACATATACCAGCCTCCATAGGTAACCTTAGTCAGTTGTATTATTTGGGTATAGCAGAAAATATGTTAGAAGGACATATACCTCTAAGTATAGGGAACTGTCAAAAGTTACAATATCTAAACCTTTCACAAAACAACCTTAGAGGAACCATACCCTCAAAGGTTTTTAGTCTTTCATCTTTAACAATGGGATTGGACTTATCACAAAACTCATTGAGTGGCATTATACCTTATGAAGTGGGTCAGTTGAAAAATATTATGAAGATTGATGTCTCTGAAAATCATCTGTCTGGTGAAATTCCTGGAGTCATTGGAGAATGCACAAGCTTGGAGTATCTTTATTTGCAAGGTAATTCCTTCCATGGAATCATACCATCCTCTTTAGCTTCAATCAAAGGACTTCAAAGATTAGACTTGTCACATAATCACTTGTCTGGTTCCATACCAAAAGGCCTGGAGAATATTTCTTTCCTACAATACATCAATGTGTCTTTTAACATGTTGGAAGGTGAAGTACCAACTGAAGGTGTCTTTCAAAATGCAAGTGGGTTGGCAATAACTGGAAACAATAACCTTTGTGGAGGTATTTCAGAGTTGCATCTACCACCATGCCCTGTCAAAGGTATAAAACATGCAAAACACCATAATTTCAAGTTGATTGCAGTGATAGTTAGTGTGGTTGCTTTCCTTCTCATGTTGTTGATTATTCTATCTATTTATTGGATGAGGAAAAGAAATAAGAAACCAACTTCTGATTCACAAACAATTGATCAGTTGGTTAAGGTTTCATACAAAGACTTATACAATGGAACTGATGGGTTCTCAGATAGAAACTTAATAGGATCTGGCAGTTTTGGCTCTGTCTACAGAGGAAGACTTGATTCAGAAGATAGATTTGTTGCCATAAAGGTCCTAAAGCTTCAAAACAAGAGAGCTCACAAGAGTTTCATTGCTGAATGTAATGCACTTAAAAATGTTAGACATCGAAATCTAGTTAAGATTCTAACATGTTGTTCCAGTACAGATTACAAAGGTCAAGAATTTAAAGCTCTAGTATTTGAGTACATGAAAAATGGAAGCTTAGAAAGTTGGCTGCATCCAGAAACAGAAACTACTGATCAACCCAAATCATTGAACCTTGAGCAAAGGTTAAATATTATTACTAATGTTGCTTCAGCATTTCATTATCTTCACTATGAATGTGAGCAACCTATCATTCACTGCGATTTAAAGCCTAGCAATGTTCTCCTTGATGATTGCATGGTAGCTCATTTGAGTGATTTTGGCTTAGCAAGATTGCTCTCAAGTGTTGGAGCCTCTTTGATGCAAAGTAGCACAATTGGAATAAAAGGGACTATTGGTTATGCTCCACCAGAGTATGGAATGGGTTCTGAGGTGTCAACTGAAGGTGACATGTATAGTTTTGGAATTCTAATTTTAGAAATGTTAACCGGAAAAAGACCCACAGGTGACATGTTTAAAGATAGTCATAATCTTCATAATTATGTCAAAATTTCAATTTCAAATGACCTTTTGCAAATTGTGGACACAACCATTCTTCTCAGTGGATTCAATAAGAAGCTTGGCATTATGCATCAGGATGCAGAGAAATGTTTGCTTTCACTTTTTAAAATTGCACTTGCCTGTTCAGTGGAATCACCAAATGATAGAATGAGTATGGCTAATGTTACAAGGGAGCTTGATCTAATCAAAAGTTTCTTTCCTACTAAGAGTTGTAATGGAGGCAAGCTGCACTACAACAACCAAAGAACACACATGATGTAA 3069 0.3649 MFPTFSFWLYLLFTFNFNPKTTASTLGNQTDNLALLKFKESISNDPYGILVSWNNSIHFCNWHGIKCNPMLQRVTGLNLKGYQLHGSISPHVGNLSFLRNLNLGNNSFFGKMPQELGRLLQLQQLILTNNSLTGEIPTNLTSCSNLKGLDLSGNNLIGKIPMGIGSLQKLQILRATENNLTGGVPPFIGNLSSLTLLYLAANNLEGVIPQEICHLKNLTTLYVPINKLSGTFPSCFYNMSSLTAISVAANEFNGSLPPNMFNTLHNLQILYIGGNQIFGPIPTSLANASALTVLDIAESHFMGQVPSLGKLQDLRWLNLYMNNLGDNSTKDLEFLKSLTNCSELYMLAISDNNFGGHLPNSLGNLSTNLNQLYLGGNHISGKILEELGNLIGLILLTMENSLFEGTIPSTFGKFQKMQKLELSENKLSGHIPASIGNLSQLYYLGIAENMLEGHIPLSIGNCQKLQYLNLSQNNLRGTIPSKVFSLSSLTMGLDLSQNSLSGIIPYEVGQLKNIMKIDVSENHLSGEIPGVIGECTSLEYLYLQGNSFHGIIPSSLASIKGLQRLDLSHNHLSGSIPKGLENISFLQYINVSFNMLEGEVPTEGVFQNASGLAITGNNNLCGGISELHLPPCPVKGIKHAKHHNFKLIAVIVSVVAFLLMLLIILSIYWMRKRNKKPTSDSQTIDQLVKVSYKDLYNGTDGFSDRNLIGSGSFGSVYRGRLDSEDRFVAIKVLKLQNKRAHKSFIAECNALKNVRHRNLVKILTCCSSTDYKGQEFKALVFEYMKNGSLESWLHPETETTDQPKSLNLEQRLNIITNVASAFHYLHYECEQPIIHCDLKPSNVLLDDCMVAHLSDFGLARLLSSVGASLMQSSTIGIKGTIGYAPPEYGMGSEVSTEGDMYSFGILILEMLTGKRPTGDMFKDSHNLHNYVKISISNDLLQIVDTTILLSGFNKKLGIMHQDAEKCLLSLFKIALACSVESPNDRMSMANVTRELDLIKSFFPTKSCNGGKLHYNNQRTHMM. 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11784 1022 SUPERFAMILY L domain-like 30 324 - -
Seca3g11784 1022 Pfam Protein kinase domain 704 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g11784 1022 FunFam LRR receptor-like serine/threonine-protein kinase EFR 672 783 - -
Seca3g11784 1022 Gene3D Ribonuclease Inhibitor 28 186 IPR032675 -
Seca3g11784 1022 ProSitePatterns Serine/Threonine protein kinases active-site signature. 833 845 IPR008271 GO:0004672|GO:0006468
Seca3g11784 1022 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 784 1007 - -
Seca3g11784 1022 SMART LRR_typ_2 414 438 IPR003591 -
Seca3g11784 1022 SMART LRR_typ_2 264 291 IPR003591 -
Seca3g11784 1022 SMART LRR_typ_2 191 215 IPR003591 -
Seca3g11784 1022 SMART LRR_typ_2 462 486 IPR003591 -
Seca3g11784 1022 SMART LRR_typ_2 239 263 IPR003591 -
Seca3g11784 1022 SMART LRR_typ_2 559 582 IPR003591 -
Seca3g11784 1022 SMART LRR_typ_2 119 143 IPR003591 -
Seca3g11784 1022 SMART LRR_sd22_2 264 290 - -
Seca3g11784 1022 SMART LRR_sd22_2 366 389 - -
Seca3g11784 1022 SMART LRR_sd22_2 414 440 - -
Seca3g11784 1022 SMART LRR_sd22_2 559 585 - -
Seca3g11784 1022 SMART LRR_sd22_2 215 241 - -
Seca3g11784 1022 Pfam Leucine rich repeat 217 277 IPR001611 GO:0005515
Seca3g11784 1022 Pfam Leucine rich repeat 537 596 IPR001611 GO:0005515
Seca3g11784 1022 ProSiteProfiles Protein kinase domain profile. 702 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g11784 1022 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 28 185 - -
Seca3g11784 1022 FunFam LRR receptor-like serine/threonine-protein kinase EFR 330 638 - -
Seca3g11784 1022 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 403 996 - -
Seca3g11784 1022 Gene3D Phosphorylase Kinase; domain 1 664 783 - -
Seca3g11784 1022 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Seca3g11784 1022 SMART serkin_6 702 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g11784 1022 Gene3D Ribonuclease Inhibitor 338 633 IPR032675 -
Seca3g11784 1022 Gene3D Ribonuclease Inhibitor 192 337 IPR032675 -
Seca3g11784 1022 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 188 281 - -
Seca3g11784 1022 SUPERFAMILY L domain-like 367 622 - -
Seca3g11784 1022 Gene3D Transferase(Phosphotransferase) domain 1 784 1007 - -
Seca3g11784 1022 ProSitePatterns Protein kinases ATP-binding region signature. 708 731 IPR017441 GO:0005524
Seca3g11784 1022 SUPERFAMILY Protein kinase-like (PK-like) 676 995 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11784 Seca-Chr3 266163245 266166614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11784 28 1002 Receptor kinase-like Gene Family AT3G47570 45.086 0.0 824
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Seca3g11784 Pkinase 6.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11784 - - gmx:100792724 1400.96