Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11725 ATGATTCAAAATGGTTGCATTTTATACCAAGGGTGCACTCCTGTGAATTCTAGGCCTTGCAAGCCGGTTATACCACGTGCCTCTGTATTGAGTTGCGCTTCTCAAATGCCTGCTAAGTTTGCTGTATCGAACATCAGGAGTTCCTGGGGACATAATTTAGAAAGTAAATCCTTGTTGCCAACAGATTTTTCTGTGATAGGAATGACATTTTCAAACATGTCCTCTGCATCAAGCCTGCTTTTAAGTGGGGGTCAAAATCTTCTGTTCCGTACTATCCCCATGTTACCCAGGGTGCGCAAGCCTTGTATGGCCCCTCGAGCATCAAAGGATGTCCCAACTAGCTTCCGTTATCCACCAATGACCACAAAACCCAAGTGGTGGTGGAGAACATTAGCATGCCTCCCTTACCTCATGCCTCTCCATGAGACATGGATGTATGCTGAGACAGCATATAATCTTCACCCGTTTTTGGAAATGTTTGAATTCTACACATACCCTTTTCTCATGGCAATTGGGAGCCTACCTAGCTGGTTTCTAATGGCATACTTCTTTGTTGCATATCTTGGCATTGTGAGGAGAAAAGAATGGCCTCATTTCTTCAGATTTCATGTTGTGATGGGAATGTTATTGGAGATAGCCTTGCAGGTTATAGGGACTGTGAGTCGTTGGATGCCACTATCACTCTATTGGGGTAAACTGGGAATGCATTTCTGGACTGCTGTTTCATTTGGTTACCTCTTTACCGTCTTGGAATGCATAAGGTGTGCCATTGTGGGTATGTATGCTGATATCCCCTTTGTCTGTGACGCAGCATATATCCAAATACCATATGATTAA 837 0.4373 MIQNGCILYQGCTPVNSRPCKPVIPRASVLSCASQMPAKFAVSNIRSSWGHNLESKSLLPTDFSVIGMTFSNMSSASSLLLSGGQNLLFRTIPMLPRVRKPCMAPRASKDVPTSFRYPPMTTKPKWWWRTLACLPYLMPLHETWMYAETAYNLHPFLEMFEFYTYPFLMAIGSLPSWFLMAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLSLYWGKLGMHFWTAVSFGYLFTVLECIRCAIVGMYADIPFVCDAAYIQIPYD. 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11725 278 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 26 278 IPR005691 -
Seca3g11725 278 Pfam Chloroplast import apparatus Tic20-like 98 271 IPR005691 -
Seca3g11725 278 NCBIfam Tic20 family chloroplast protein importer 1 278 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11725 Seca-Chr3 265612436 265614525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11725 44 278 Chloroplast and Mitochondria Gene Families AT4G03320 37.959 7.24e-50 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11725 - - gmx:100818669 478.404