Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca3g11705 | ATGGCAACTTTGATATTGCCCAAGATAAGCTTGCTGATGCTTGTGCTGTGCCTTTTCCTCTCTTTCGATGACCACAAGTATACCGAAATCCCCAACAACACATTGAACACCATTCCCATACATTCCTTTTCCAAAGGCCCTGTCTCTTTATCTGTCAAGAACTCTGATTCTTCTTCTCACTCCTTCCTTGAATATGATTTCTACCGCAATTCCTGCCCCCAAGCAGAGCGTATTGTTCGTGCTACAATTCACCATATTCATCGCGCTACACCCAATTTGGTTCCTGCTCTCATTCGTCTTGCTTTCCATGATTGCTTCATTCAGGGATGTGATGCTTCTGTTTTGTTAGATGGTGATGATTACATTGATTCAGAGAAAGAGTCGCCACCCAATGGAAGTCTTAAAGGCTTTGAAGTCATCGAGACCATCAAATCCAAACTTGAAGAAGCATGCCCTGGGGTTGTTTCTTGTGCTGATATTGTTGTATTGGCAGCAAGAGACTGTGTGGTTCTGGCTGGTGGTCCATTCTATCCTTTATATACAGGCAGAAGAGATGGTTCTAACTCTTTCGCTGACATAGCAACATACGAGCTTCCTTCACCCTATGGTGATTTATCCCAAACCCTTGCATCCTTCAAATCAAGGGGATTTGATGAAAAAGAGATGGTCACTCTCTTAGGTTCCCACAGCATTGGGGTAATACACTGCCAATTCTTCCAAAACCGTCTCTATAACTTTAGTGGAACTAATGAACCTGACCCTTCTCTGGATATTGAATTTCTAAATCTACTAAGATCAAGGTGCAATCATACTGATGCATCATCCTCTCCAGCATCAGGATATACTTCCCATGGCTCAAATTCATCTGTAGCATTTAAGTCAACTCCATTCAAAGGCTCATCTTCTTCCTCAGTTGAAGATCCAGGAATGATTATGGACTCGGAGCAACCTCAATCAGATTTTGGGATGTTATACTACCGCAGCCTATTGGAAGGTAAAGGAATCCTCTATGCTGATCAGCAGCTAATGGAAGGAGAAAAAACCAAGCATTTGGTTAAAGAATATGCATTTAATCCTACTTTGTTCCAACAAGATTTTGCCCTGGCAATGATGAAACTCTCAGATCTCCGGGTCTTGACACTGCCTATGGGACAGATTCGGCTCAATTGTTCAAAGGTTGCATGA | 1185 | 0.4245 | MATLILPKISLLMLVLCLFLSFDDHKYTEIPNNTLNTIPIHSFSKGPVSLSVKNSDSSSHSFLEYDFYRNSCPQAERIVRATIHHIHRATPNLVPALIRLAFHDCFIQGCDASVLLDGDDYIDSEKESPPNGSLKGFEVIETIKSKLEEACPGVVSCADIVVLAARDCVVLAGGPFYPLYTGRRDGSNSFADIATYELPSPYGDLSQTLASFKSRGFDEKEMVTLLGSHSIGVIHCQFFQNRLYNFSGTNEPDPSLDIEFLNLLRSRCNHTDASSSPASGYTSHGSNSSVAFKSTPFKGSSSSSVEDPGMIMDSEQPQSDFGMLYYRSLLEGKGILYADQQLMEGEKTKHLVKEYAFNPTLFQQDFALAMMKLSDLRVLTLPMGQIRLNCSKVA. | 395 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca3g11705 | 394 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 221 | 231 | IPR019793 | - | |
| Seca3g11705 | 394 | Gene3D | Peroxidase, domain 2 | 312 | 373 | - | - | |
| Seca3g11705 | 394 | Pfam | Peroxidase | 79 | 356 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Seca3g11705 | 394 | PRINTS | Haem peroxidase superfamily signature | 173 | 185 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Seca3g11705 | 394 | PRINTS | Haem peroxidase superfamily signature | 155 | 172 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Seca3g11705 | 394 | PRINTS | Haem peroxidase superfamily signature | 94 | 108 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Seca3g11705 | 394 | PRINTS | Haem peroxidase superfamily signature | 221 | 236 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Seca3g11705 | 394 | FunFam | Peroxidase | 66 | 201 | - | - | |
| Seca3g11705 | 394 | Gene3D | - | 374 | 393 | - | - | |
| Seca3g11705 | 394 | Gene3D | - | 67 | 198 | - | - | |
| Seca3g11705 | 394 | PRINTS | Plant peroxidase signature | 220 | 232 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Seca3g11705 | 394 | PRINTS | Plant peroxidase signature | 154 | 164 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Seca3g11705 | 394 | PRINTS | Plant peroxidase signature | 173 | 188 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Seca3g11705 | 394 | PRINTS | Plant peroxidase signature | 72 | 91 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Seca3g11705 | 394 | PRINTS | Plant peroxidase signature | 96 | 116 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Seca3g11705 | 394 | PRINTS | Plant peroxidase signature | 135 | 148 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Seca3g11705 | 394 | PRINTS | Plant peroxidase signature | 368 | 381 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Seca3g11705 | 394 | PANTHER | PEROXIDASE 25-RELATED | 19 | 380 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Seca3g11705 | 394 | SUPERFAMILY | Heme-dependent peroxidases | 63 | 393 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
| Seca3g11705 | 394 | Gene3D | Peroxidase, domain 2 | 199 | 275 | - | - | |
| Seca3g11705 | 394 | ProSitePatterns | Peroxidases active site signature. | 94 | 105 | IPR019794 | GO:0004601 | |
| Seca3g11705 | 394 | ProSiteProfiles | Plant heme peroxidase family profile. | 62 | 394 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Seca3g11705 | 394 | CDD | secretory_peroxidase | 63 | 393 | IPR033905 | GO:0004601|GO:0042744 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Seca3g11705 | Seca-Chr3 | 265472048 | 265474008 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Seca3g11705 | 60 | 393 | Peroxidase | AT4G33870 | 50.298 | 4.95e-118 | 347 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca3g11705 | K00430 | - | mof:131158483 | 452.595 |