Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11679 ATGGGTCATCAGGAACCGGCGAAGCTGCGGTGGGGTGAATTGGAAGAGGACGACGGCGAGGATCTTGACTTCTTGCTGCCGCCTCGCCAAGTCATAGGGCCCGACGAGAATGGAATAAAGAAAGTCATAGAATACAAGTTCGACGACGACGGCAACAAGGTCAAGATAACCACCACCACGCGCACCCGCAAGCTCGCCAATGCCCGCCTCAGCAAACGCGCCGTCGAACGCCGTTCCTGGCCCAAGTTCGGTGACGCCGTCCATGAGGATGTCGGCAGTCGCCTCACCATGGTCTCCACCGAAGAGATCCTCCTCGAACGCCCCAAGCCTCTTGGTGTGCCAAAACAGAGGAGCCAAAGGCTTCTGACCCATTGGCTCAATTCCAAAAAGGTGCTGTTCTTATGGTCTGCAGGACTTGTGGGAAGAAGGGTGACCATTGGACTTCAAGGTGTCCGTACAAGGATCTTGCCCAGCCATCTGAGGGATTTGTGGATAAGCCTGCTGCAGCGGATGTTGGGGCTGCTGCAACTGGTTCAACCAAGGGAGCATATGTACCTCCTGGCATGA 567 0.5608 MGHQEPAKLRWGELEEDDGEDLDFLLPPRQVIGPDENGIKKVIEYKFDDDGNKVKITTTTRTRKLANARLSKRAVERRSWPKFGDAVHEDVGSRLTMVSTEEILLERPKPLGVPKQRSQRLLTHWLNSKKVLFLWSAGLVGRRVTIGLQGVRTRILPSHLRDLWISLLQRMLGLLQLVQPREHMYLLA. 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11679 188 Pfam Eukaryotic translation initiation factor 3 subunit G 30 113 IPR024675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11679 Seca-Chr3 265310880 265312036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11679 3 128 Eukaryotic Initiation Factors Gene Family AT3G11400 66.667 3.14e-52 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11679 K03248 - gmx:100818725 206.838