Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11669 ATGATCCTTTTCTTGGTTGCTTCAGCTACGCAATTCAAAGTTGGTGATGACCAATTGGGCTGGCATGAACCTTCTCCCAACAATACTGCAGTTTATACTCAATGGGCTGCAAGGAACAGGTTTCAAGTTGATGATTCTCTCCGTAAGTTTGTTCATATTATTATACATATACTTTTTGAGTACCAGAATGACTCTGTTCTGATTGTGGAGAAATGGGATTATTTTCATTGTGACCCACGTGACCCCATCACTTCATTTGACAATGGGAACACCACAATCAACCTTGACAGGCCTGGTGCCTTCTATTTCATCAGTGGAACTGATGATCATTGCCAAAAAGGCCAGAAATTAATTGTTGAAGTCATGTCACCACATCCAATTCATACTTCTCCTCCACCTTCAATTTCTATTCCACCACCAACAATGCCTCCTTCAACTTCTCAATCTCATAGCTCAGCCTCCATGGTGATTGCTTCAGTCTTTATCCCTCTTTTGGCCACATTTGTAATTGTGCTTCTTTTAGCACCCTGA 531 0.4124 MILFLVASATQFKVGDDQLGWHEPSPNNTAVYTQWAARNRFQVDDSLRKFVHIIIHILFEYQNDSVLIVEKWDYFHCDPRDPITSFDNGNTTINLDRPGAFYFISGTDDHCQKGQKLIVEVMSPHPIHTSPPPSISIPPPTMPPSTSQSHSSASMVIASVFIPLLATFVIVLLLAP. 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11669 176 ProSiteProfiles Phytocyanin domain profile. 10 123 IPR003245 GO:0009055
Seca3g11669 176 Gene3D - 8 125 IPR008972 -
Seca3g11669 176 PANTHER BLUE COPPER PROTEIN 8 146 IPR039391 GO:0009055
Seca3g11669 176 SUPERFAMILY Cupredoxins 9 122 IPR008972 -
Seca3g11669 176 MobiDBLite consensus disorder prediction 129 149 - -
Seca3g11669 176 FunFam Early nodulin-like protein 1 9 126 - -
Seca3g11669 176 Pfam Plastocyanin-like domain 28 115 IPR003245 GO:0009055
Seca3g11669 176 CDD OsENODL1_like 10 122 IPR041846 -
Seca3g11669 176 MobiDBLite consensus disorder prediction 129 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11669 Seca-Chr3 265194627 265195407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11669 12 136 Phytocyanin Superfamily AT1G79800 53.125 7.42e-43 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11669 - - aip:107614831 174.481