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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Seca3g11666
ATGGAAGCGCCGGAATACTTCATCGGTGGCTTTTACGGCGCCGGAGGAGCCGACCAATTCTCGCAGGCAGAGAAGCGCCACAGCGACCAGAAACCCGGCGAGCCTTTCGCCATTGATGACCTTCTCGACTTCTCCAATGCCGACGCCATTATGTCCGACGGTTTCTTCGACAATGTCGCCGGGAACTCTGCTGACTCCTCCACCGTCACTGCCGTCGACAGTTGCAACTCCTCAATTTCTGGCGGTGATAACCACTTCGCCGCCGCCATTGTCCCTCGCGGCTTCGCCTGCGATCCTCAACTCACCGGAGAACTCTGTGTTCCGCAGTACGATGACATGGCGGAACTGGAATGGCTCTCGAACTTCGTGGAAGACTCGTTCTCCGCCGAAGAGGAGTTGAAAACGCTGCAACTTCTCTCCGGCGCTGCTGCTTCCTCAACCGTTGGTGCTAAGCCTCAGACACCGGAGTCGTCCTCTTCCACCGACACTCTCCCGCCGTTCGCCACCGACGACAGCACTCGAAACGCTCCATTTCTCCATTCGGAAACCCCGCTCCCGGGGAAGGCACGCAGCAAGCGTTCACGCGCGGCGCCGGGGGACTGGTCCACGCGCCTCCTTCACCTTGCTGTGCCAGCTGACGCGCCGCCGCAGCAGAAGGTGGCACCGGCGAAGAAGCGGGAAGGTTCAAACGCGGAGTGCTCAGGGAGGAAATGCCTTCACTGCGGCGCGGAGAAAACGCCGCAATGGCGGACGGGGCCAATGGGACCGAAGACGCTGTGCAATGCGTGCGGTGTGAGGTTCAAGTCCGGTAGGTTGGTGCCGGAGTACCGGCCGGCGGCGAGCCCGACGTTCGTGTCGACGAAGCACTCGAATTCGCACAGGAAAGTTTTGGAGTTGAGGAGGCAAAAGGATCTGCAACGACAGCAGCATCAGCAACTGATGAGTCAGACTTCGATTTTCGGCGTATCCAACGGTGGAGATGACTTCATGATTCATCATCATCATCACCATTGTGGGCCAGACTTTAGGCATGTTATCTAG
1041
0.5898
MEAPEYFIGGFYGAGGADQFSQAEKRHSDQKPGEPFAIDDLLDFSNADAIMSDGFFDNVAGNSADSSTVTAVDSCNSSISGGDNHFAAAIVPRGFACDPQLTGELCVPQYDDMAELEWLSNFVEDSFSAEEELKTLQLLSGAAASSTVGAKPQTPESSSSTDTLPPFATDDSTRNAPFLHSETPLPGKARSKRSRAAPGDWSTRLLHLAVPADAPPQQKVAPAKKREGSNAECSGRKCLHCGAEKTPQWRTGPMGPKTLCNACGVRFKSGRLVPEYRPAASPTFVSTKHSNSHRKVLELRRQKDLQRQQHQQLMSQTSIFGVSNGGDDFMIHHHHHHCGPDFRHVI.
347
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Seca3g11666
346
ProSitePatterns
GATA-type zinc finger domain.
238
263
IPR000679
GO:0006355|GO:0043565
Seca3g11666
346
Pfam
GATA zinc finger
238
271
IPR000679
GO:0006355|GO:0043565
Seca3g11666
346
PANTHER
GATA TRANSCRIPTION FACTOR
24
311
-
-
Seca3g11666
346
FunFam
GATA transcription factor
227
313
-
-
Seca3g11666
346
PIRSF
Txn_fac_GATA_plant
19
324
IPR016679
GO:0003677|GO:0005634|GO:0045893
Seca3g11666
346
SUPERFAMILY
Glucocorticoid receptor-like (DNA-binding domain)
235
295
-
-
Seca3g11666
346
Coils
Coil
296
316
-
-
Seca3g11666
346
MobiDBLite
consensus disorder prediction
146
198
-
-
Seca3g11666
346
CDD
ZnF_GATA
237
284
IPR000679
GO:0006355|GO:0043565
Seca3g11666
346
ProSiteProfiles
GATA-type zinc finger domain profile.
232
268
IPR000679
GO:0006355|GO:0043565
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Seca3g11666
Seca-Chr3
265174700
265175876
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Seca3g11666
34
346
C2C2-Gata Transcription Factor Family
AT4G32890
45.846
2.17e-84
256
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
C2C2-GATA
Seca3g11666
GATA
4.6e-15
CL0167
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Seca3g11666
-
-
gmx:100776605
574.704
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