Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11635 ATGGCTATGCCTAACTTCCATCCTCCTTCTTCAATAGGGGTCATTTTCTATTGCCATATAAGTTGTGATACATTGAAGAAAGCCTCCAAAAGCAGAAAAATGATGAACATCAATAGCAAAGAATCAGCACTTGTTCTTCTACTCTCTGCATTTCTCTTCCTTACTTGTGGCTATGCACAAGACGCTGCACTTGTACCAGCAATCATAACATTTGGTGACTCTGCCGTCGATGTAGGGAATAATGACTATCTTCCCACTCTTTTCAAGGCTGATTACCCTCCTTATGGGAGAGACTTTGTTAACCACCAACCTACTGGGAGGTTTTGTAATGGAAAATTAGCTACTGATATTACTGCTGAAACACTGGGTTTTACGAGTTATGCACCTGCATATCTTAGCCCACAGGCATCAGGGAAGAACCTTCTTATTGGAGCAAACTTTGCTTCAGCTGCATCTGGTTATGATGAAAAGGCTGCTATTTTGAATCATGCTATCCCATTGTCCCAACAGCTAAATTATTACAAGGAATACCAAAGCAAGCTTGCTCAGGTAGCTGGCAGTAATAAAGCAGCCTCAATTATAAAGGATGCACTGTACTTATTGAGTGCTGGAAGCAGTGATTTTGTACAAAACTATTATGTCAATCCTTGGATCAACAAGGCCTTGACTCCTGACCAGTATTCATCCTACCTAGTGGATGCATTCTCAAGCTTTGTTAAGGTATTCTGTAAAGCCCTATTACATGTAGTTATTAGGTCACTATTGGAATATAACTTGTATGGATTGGGAGCTAGGAAAATTGGAGTGACTTCACTCCCACCATTGGGTTGCCTACCTGCTGCAAGGACTTTATTTGGTTTCAATGAGAATGGTTGTGTCTCAAGACTCAACACTGATGCCCAAGGATTTAACAAGAAGGTCAACTCAGCTGCTGCAAATCTTCAAAAGCAACTTCCTGGTCTTAAGATTGTAATTTTTGATATTTACAAGCCTCTCTATGACCTTGTACAATCCCCTTCAAAATTCGGTTTTGTGGAGGCAAGCAGAGGCTGCTGTGGTACAGGGACTGTAGAGACAACATCCTTGTTGTGCAATCCAAAATCACCAGGAACTTGTTCTAATGCAACCGAGTATGTGTTTTGGGACAGTGTCCATCCTTCACAAGCTGCTAACCAAGTTCTGGCTGATGCATTAATTGTGCAAGGCATAGCTCTTATCACATAA 1224 0.4126 MAMPNFHPPSSIGVIFYCHISCDTLKKASKSRKMMNINSKESALVLLLSAFLFLTCGYAQDAALVPAIITFGDSAVDVGNNDYLPTLFKADYPPYGRDFVNHQPTGRFCNGKLATDITAETLGFTSYAPAYLSPQASGKNLLIGANFASAASGYDEKAAILNHAIPLSQQLNYYKEYQSKLAQVAGSNKAASIIKDALYLLSAGSSDFVQNYYVNPWINKALTPDQYSSYLVDAFSSFVKVFCKALLHVVIRSLLEYNLYGLGARKIGVTSLPPLGCLPAARTLFGFNENGCVSRLNTDAQGFNKKVNSAAANLQKQLPGLKIVIFDIYKPLYDLVQSPSKFGFVEASRGCCGTGTVETTSLLCNPKSPGTCSNATEYVFWDSVHPSQAANQVLADALIVQGIALIT. 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11635 407 Gene3D SGNH hydrolase 57 402 IPR036514 -
Seca3g11635 407 SUPERFAMILY SGNH hydrolase 68 398 - -
Seca3g11635 407 Pfam GDSL-like Lipase/Acylhydrolase 68 397 IPR001087 GO:0016788
Seca3g11635 407 PANTHER GDSL ESTERASE/LIPASE EXL3 51 398 - -
Seca3g11635 407 CDD SGNH_plant_lipase_like 66 399 IPR035669 -
Seca3g11635 407 FunFam GDSL esterase/lipase APG 58 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11635 Seca-Chr3 264802792 264805064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11635 44 399 Pollen Coat Proteome AT1G75910 32.869 9.48e-56 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11635 - - gmx:100793645 643.269