Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11633 ATGAATGTGACAGATAACATGAAAAGAGAAGGAGCATGTCCATGGATTGTGACCTTAATGTTAAACGTATGCGTATGGCTTGCCTTACTTCCACTCTGTATTACTCATGTCAATTCAGAACTAGACAAACCTGTTGCAAGAGATATTGTTAACGATAAACATCCTGGTTTCATAAGCATTGATTGTGGATCAAAAACAGATTACTTTGACAGTGATATTGGAATTTGGTATCAATCAGACAAAGAGTTTGTGAAAACAGGAACGAATCATCTGATTTCTTTAACTAAAGACTTAAACTATCTCTACTTTGGGAGACGGTTGAACACATTGAGATACTTTCCAGAAGGAGAGAGGAACTGCTACAGGTTGAAACCAGAGCAGGGGAAAAATAATAGTTATCTGATCAGAGCTTTCTTTGCATATGGAAATTATGACGGCAAAAATCAAACCCAATCTTTTGAACTGCATCTTGGAGTCAATCGTTGGGAAAATGTTAGTGTTGGTCTCTCTGGTTACAGTTTCGCGGAGGTGATTCACACTCCGTCAAGTGACAGCATAGATGTGTGCCTTGTAAAGACTGGTCCAACAATCCCTTTCATTTCTTCCTTAGAATTACGGCCTTTGAACAATTCCATTTATCAGAATCATGAGATCATGTCCAGCACTGATCCACAGCCACTTCTAAGGCTTGAAGTCAGGGTTGATGCTGGCTCCCCTCAATTGCCTCCGCCGGATTATAACAAGTACAAAGATGACGTGTATGATCGGATGTGGCGTTGTGACCCAAATTACAATGAGAGTGGTTGGTATCCGTTGGAATTGGAAGAAGAATCAATTGATATTGGTCCTGGAAGCAATGGTGATGCTTATAAATTGCCAGGCCAAGTATTAAGGAGTGCAGCTGTAGCCAATTCATCGGATTTTCCCTTAGAATTCGACTATGACACTGTGTTTGATGAGCCCCTTGACAGGCCTTTTGAGTATCTTGTCTACTTCCACTTCGCTGAGATTCAGAAACTTCCAGATGGGGAAAAAAGAATAATCGGTATCACCCTTAACTCTAAACCCGTTCTCTCACAGCCTTTGGAGCTTGAATACTTGAAGCCCGTTACTCTTAACTACTCAACTCAAGGTGATGTCTGGTTTAGCATAAGCGCAACGTCACAATCGGATGCTCCCCCTATCCTCAACGCCTATGAGATCTATCAGTTGATAACGGAACTTAGTTCATCAACAGACACTCAAGATGTTAGTGCTATTGAGGATATTAAAAGCACCTACCAGATCTCCAGATTGAATTGGCAAGGAGACCCCTGTCTTCCAAATCAATATGCATGGGAGGGTCTTATTTGCAGCTCTGCAGACACCAATCCTTCTCCGAGGATCACATCTTTGTCAGAACCTGAGTTCAAGCAATCTGGCGGGACAGATAACTACTTCATTCTCATATCTCACAGAACTAGAATTCCTAATCCTCACCAAGGCTACAACACTATATATGCCAACATTAATTCATTCATTCTAGACAAGGATTTGTCACACAACGACTTGGAAGGACCTCTTCCGGAATTTCTGGCAGAATTGCCAAAGTTAAAAGTCCTTAATTTAACAGGGAACAAGCTTTCGGGTCCAATTCCTAAGCCTCTCAAGGAAAAGGCAGATACCACTTTGCAATTAAGTGTGGCTGATAATCCTGATCTTTGTATGACGGATCCATGCAAAAAGAAGAACTTTGTTGTACCACTTGTTGTTGCATCACTTTCAGCTTTAATTTTAATCCTCTTCATTTCTCTTGCATTTTGGATATACAGAAGACGAAAAGTTGTGCGTTCTGATTCTAAGAAGGGGGGTTCATTGAAATCAAAACTTCAAGCATTCAGTTACAATGAGATTCTCAATATTACTGATAACTTCAAAACTACTATTGGAGAAGGTGGATTTGGAAGAGTTTACTTTGGCATTCTACAAGATCACACCCAAGTTGCTGTTAAGTTGCTTTCACGGTCGTCAATGCAAGGTTATAAGGAATTCCGATCAGAGGCACAACTTCTAATGAAAACTCATCACAGAAATTTAGTCTCTCTAATTGGGTACTGCGATGAAGGTGAAATTAAAGCATTGATTTATGAATACATGGCCAATGGAAATCTCCAACAACATTTATCAGTAGACAATCCAAATGTCTTAAACTGGAATAAGAGACTTAATATCGCAGTTGATGCAGCACAAGGATTAGATTATCTGCATAATGGCTGTACACCACCTCTTATCCATAGAGATTTGAAAACTGCCAACATATTACTAGATCACAACATGAATGCCAAGATAGCTGATTTTGGTCTAAGTAGAGCTTTCGGTAATGATATTGATTCTCATGTATCAACTCGCCCTGCTGGGACACTAGGTTATGTTGATCCAGAATTTCAGAGAACCGGAAACTCAAATAAGAAATGTGATATCTACAGCTTTGGGATAATTCTATTTGAGTTAATCACTGGCCAAAAAGCATTAGTAAGGGCACCTGGAAAAAACATAAACATGCACATACTTGAATGGGTTATTCCAATAGTTGAAAGAGGAGATATTCAAGACATTGTTGATGGGAGGTTGAAGGGAGAATTCAGTATAAATTCTGCATGGAAAGCTGTAGAGATTGCCATGTCATGCACTTCAACAACTGCAGCTGTAAGGCCAGACATCAGCCAAATACTGGTGGATCTAAAGGAATGTATATCTTTGGAGATGGTTCATAAAAATCGTGAAAGTGCAAGAACTACAATTGAATTGACTACTTCTGTGCAGATTGACTTGGAAACTGCTCCATTCGCTAGGTAG 2835 0.3982 MNVTDNMKREGACPWIVTLMLNVCVWLALLPLCITHVNSELDKPVARDIVNDKHPGFISIDCGSKTDYFDSDIGIWYQSDKEFVKTGTNHLISLTKDLNYLYFGRRLNTLRYFPEGERNCYRLKPEQGKNNSYLIRAFFAYGNYDGKNQTQSFELHLGVNRWENVSVGLSGYSFAEVIHTPSSDSIDVCLVKTGPTIPFISSLELRPLNNSIYQNHEIMSSTDPQPLLRLEVRVDAGSPQLPPPDYNKYKDDVYDRMWRCDPNYNESGWYPLELEEESIDIGPGSNGDAYKLPGQVLRSAAVANSSDFPLEFDYDTVFDEPLDRPFEYLVYFHFAEIQKLPDGEKRIIGITLNSKPVLSQPLELEYLKPVTLNYSTQGDVWFSISATSQSDAPPILNAYEIYQLITELSSSTDTQDVSAIEDIKSTYQISRLNWQGDPCLPNQYAWEGLICSSADTNPSPRITSLSEPEFKQSGGTDNYFILISHRTRIPNPHQGYNTIYANINSFILDKDLSHNDLEGPLPEFLAELPKLKVLNLTGNKLSGPIPKPLKEKADTTLQLSVADNPDLCMTDPCKKKNFVVPLVVASLSALILILFISLAFWIYRRRKVVRSDSKKGGSLKSKLQAFSYNEILNITDNFKTTIGEGGFGRVYFGILQDHTQVAVKLLSRSSMQGYKEFRSEAQLLMKTHHRNLVSLIGYCDEGEIKALIYEYMANGNLQQHLSVDNPNVLNWNKRLNIAVDAAQGLDYLHNGCTPPLIHRDLKTANILLDHNMNAKIADFGLSRAFGNDIDSHVSTRPAGTLGYVDPEFQRTGNSNKKCDIYSFGIILFELITGQKALVRAPGKNINMHILEWVIPIVERGDIQDIVDGRLKGEFSINSAWKAVEIAMSCTSTTAAVRPDISQILVDLKECISLEMVHKNRESARTTIELTTSVQIDLETAPFAR. 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11633 944 Pfam Malectin-like domain 60 403 IPR024788 -
Seca3g11633 944 ProSitePatterns Serine/Threonine protein kinases active-site signature. 756 768 IPR008271 GO:0004672|GO:0006468
Seca3g11633 944 Gene3D Ribonuclease Inhibitor 499 578 IPR032675 -
Seca3g11633 944 FunFam Leucine-rich repeat receptor-like protein kinase 614 711 - -
Seca3g11633 944 ProSiteProfiles Protein kinase domain profile. 636 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g11633 944 SUPERFAMILY Protein kinase-like (PK-like) 621 907 IPR011009 -
Seca3g11633 944 Gene3D Transferase(Phosphotransferase) domain 1 712 934 - -
Seca3g11633 944 Pfam Protein tyrosine and serine/threonine kinase 638 904 IPR001245 GO:0004672|GO:0006468
Seca3g11633 944 SUPERFAMILY L domain-like 511 549 - -
Seca3g11633 944 SMART serkin_6 636 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g11633 944 CDD STKc_IRAK 642 909 - -
Seca3g11633 944 ProSitePatterns Protein kinases ATP-binding region signature. 642 664 IPR017441 GO:0005524
Seca3g11633 944 Gene3D - 229 404 - -
Seca3g11633 944 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 712 920 - -
Seca3g11633 944 Gene3D Phosphorylase Kinase; domain 1 617 711 - -
Seca3g11633 944 PANTHER OS07G0107800 PROTEIN-RELATED 58 911 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11633 Seca-Chr3 264753825 264760189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11633 45 944 Receptor kinase-like Gene Family AT3G46400 40.214 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Seca3g11633 Malectin_like 3.5e-82 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11633 - - mtr:25500358 1093.57