Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11574 ATGAAGGTGGAAATTGGAGTTTGGAGTTTGGGACAACGCCAACTGTTTTGTCTTGCAAGAGTATTACTTAAGAGGAACAGAATCCTTGTTCTAGATGAAGCTACTGCATCCATTGACACTGCAACAGATGCCATTCTACAAGGAGTAATTAAACAAGAATTTGCAGAATGCACAGTTATAACTGTGGCTCACAGAGTTCCAACTGTAATAGACAGTGACATGGTCACGGTCCTGTCTTATGGGAAACTAGTGGAATATGAAGAGCCTTCAAAACTTATGGATACAAACTCTTCATTCTCTAGATTGGTTGCTGAATATTGGTCCAGCTGCAGGAAGAATTCCTCCCCACACATTTAA 357 0.4062 MKVEIGVWSLGQRQLFCLARVLLKRNRILVLDEATASIDTATDAILQGVIKQEFAECTVITVAHRVPTVIDSDMVTVLSYGKLVEYEEPSKLMDTNSSFSRLVAEYWSSCRKNSSPHI. 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11574 118 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 8 107 - -
Seca3g11574 118 Pfam ABC transporter 8 36 IPR003439 GO:0005524
Seca3g11574 118 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 104 IPR027417 -
Seca3g11574 118 Gene3D - 1 115 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11574 Seca-Chr3 264083803 264085125 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11574 9 103 Calmodulin-binding Proteins AT2G36910 31.959 7.31e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11574 - - gmx:100784827 192.2