Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11515 ATGGCGTACCGCTCCCCCGATCACGAATCAGGATCCGATCCGAATCCCCAAACCCGACTCTACAACCCCTACAAGGACCTCGAGGTCCCCATCCGAAACCTCTACCAGCTTCCTACCTCCCCGGAGTACCTCTTCGTCGAGGAGGCTCGCCGCAAGCGCCGCTCCTGGGGCGAGAACCTTACCTTCTACACCGGCTGCGGCTACCTCGCCGGTGCCCTTGCAGGAGCTGGTGTTGGCCTCGTCGACGGCGTCAAATCCTTCGAGTCCGGCGACACTGCGAAGCTCCGAATCAACCGCGTACTCAACTCCTCCGGGCATTCGGGTCGGACGTGGGGAAACCGTGCCGGCATAATTGGGCTGCTCTACGCCGGCATCGAGAGTGGGATCGAGGCCGCGAGGGACGCCGACGACGTATGGAACAGCGTGGCGGCGGGACTCGGCACCGGCGCGCTGTATCGGGCGGCGAGAGGGGTGCGATCCGCTGCGGTGGCCGGAGCGGCGGGTGGCGTTCTGGTTGGGGTGGCTGTGACGACGAAGCAGGCGTTGAAACGATACGTTCCTATATGA 567 0.6437 MAYRSPDHESGSDPNPQTRLYNPYKDLEVPIRNLYQLPTSPEYLFVEEARRKRRSWGENLTFYTGCGYLAGALAGAGVGLVDGVKSFESGDTAKLRINRVLNSSGHSGRTWGNRAGIIGLLYAGIESGIEAARDADDVWNSVAAGLGTGALYRAARGVRSAAVAGAAGGVLVGVAVTTKQALKRYVPI. 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11515 188 PANTHER TIM23 32 177 IPR045238 GO:0022857
Seca3g11515 188 Pfam Tim17/Tim22/Tim23/Pmp24 family 62 171 - -
Seca3g11515 188 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11515 Seca-Chr3 263413063 263413629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11515 7 188 Chloroplast and Mitochondria Gene Families AT1G72750 72.432 1.97e-82 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11515 K17794 - gmx:100777112 289.271