Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11485 ATGGAGCTGCCAGATTTTTCAAAAGCCACAAGTCTTAAAGTAATTGATCTCCGTCACTGTGTAGGGTTGACAAGTGTGCATCCATCTGTTTTGTCTCTCAACAAGCTTGAAAAATTGGATCTAAGTGGATGCATTTCCCTTACAAGCCTTCAAAGCAATACCCATTTAAGCTCACTTCGTTCTCTCTCCCTCTGTGGCTGCACAGCACTAAAGGAATTCTCAGTGACCTCAGAGAATATGATGCAATTGAATTTAGGTCTCACAGGTATCAAACAATTGCCCTCATCTATTGGACTTCAAAGCAAACTTGAAAAGCTACACCTAGGATACACTAACATTGACAACTTACCTGAAAGCATCAAGCACCTTACAAAGCTGAGATATTTAGACTTACAACATTGCAAGGAGCTTCAAACTCTACCAGAGCTTCCCTCATCATTGGAAATACTAAATGCTGGTGGCTGTGTATCACTAGAGACTGTAATGTTTCCTTCAACAGCTATTGAACGATTGAAGGAAAACAAGAGAAGGGTTGAGTTCTGGAATTGCTTGAAATTGGATGAACATTCTCTGAGAGGTATTGAACTGAATGCACAAATTAACATGATGAGATTGGCACACCAACATGTAACCACAAGTGGTCATGATTATGATGCTCAAGACATGTATGTGTATCCAGGAAGCAAAGTTCCAAAGTGGTTGGAATACAGTACAACACATGATCACTTAACTATTGATCTCTCTTCTGCTCCTTATTTCCCTCAATTAGGCTTCATTTTCTGCTTCATTATCCCAGCCATCTCATCAGAGGGTTTGATTGAAGTTTAA 828 0.3973 MELPDFSKATSLKVIDLRHCVGLTSVHPSVLSLNKLEKLDLSGCISLTSLQSNTHLSSLRSLSLCGCTALKEFSVTSENMMQLNLGLTGIKQLPSSIGLQSKLEKLHLGYTNIDNLPESIKHLTKLRYLDLQHCKELQTLPELPSSLEILNAGGCVSLETVMFPSTAIERLKENKRRVEFWNCLKLDEHSLRGIELNAQINMMRLAHQHVTTSGHDYDAQDMYVYPGSKVPKWLEYSTTHDHLTIDLSSAPYFPQLGFIFCFIIPAISSEGLIEV. 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11485 275 Gene3D Ribonuclease Inhibitor 80 248 IPR032675 -
Seca3g11485 275 Pfam Leucine Rich Repeat 35 53 IPR001611 GO:0005515
Seca3g11485 275 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 79 164 - -
Seca3g11485 275 Pfam Leucine rich repeat 79 135 IPR001611 GO:0005515
Seca3g11485 275 SUPERFAMILY L domain-like 3 186 - -
Seca3g11485 275 Gene3D Ribonuclease Inhibitor 1 79 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11485 Seca-Chr3 263007646 263008473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11485 2 150 WRKY Transcription Factor Family AT4G12020 38.667 8.64e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11485 - - mtr:11419915 373.629