Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11448 ATGTCAATTGAATTATTGGCATCAGCTACTCCCAGTTGGTTCACAACTGCAGCCACATGGTTTGCAACCATTGCCGTCCTCCTCCTCTTCAGCCACCGTCTCCGCCGCCGCAAATATAACCTTCCACCAGGCCCAAAACCATGGCCCATCATAGGAAACCTCAACTTAATTGGATCTCTCCCACACCGATCCATCCACTCTCTCAGCCAAAAGTATGGACCCATCATGCATGTCTGGTTCGGCTCCAACCCTGTCGTTGTGGGCTCATCCGTGTACATGGCAAAAGCCTTCCTCAAAACCCACGACGCCACCGTCGCCGGCAGGCCCAAATTCGCTGCTGGCAAGTACACAACCTACAACTATTCAGACATAACTTGGTCCCAATACGGCCCATACTGGCGTCAGGCCCGTAAAATGTGCCTAATGGAATTGTTCAGCGCAAAGCGCCTTGAATCCTATGAGTACATTAGAAAGCAAGAGTTACATGCTTTTCTGAATGAACTCTTTAACTCTGCAAACAAAACCATTTTGTTGAAAGATCACCTTTCTGATTTGAGCCTTAATGTTATAAGCCGTATGGTGTTGGGGAAGAAGTACACGGAAAAATCAGATAACGCAATAATTTCCCCTGATGAGTTCAAGAAGATGCTGGATGAGTTGTTCTTGCTTAATGGGGTGCTTAACATAGGGGATTTCATTCCTTGGATTAATTTCTTGGATTTGCAGGGTTACATAAAGAGGATGAAGGCTTTGAGCAAGAAATTTGATAGGTTTATGGAGCATGTGTTGGAGGAACATATTGAGAGAAGGAAAGGGGTGGAGGATTATGTTGCCAAAGATATGGTGGATGTGCTTTTGCAGCTTGCAGAGGACCCTGCTCTTGAGGTTAAGCTTGAGAGGCATGGAGTCAAAGCTTTTAGTCAGGACCTAATAGCAGGTGGGACAGAGAGCTCAGCTGTAACTGTTGAATGGGCAATCTCTGAGCTCTTGAGAAAGCCAGAGATCTTCAAGAAGGCGACAGAGGAGCTAGACAGGGTGATAGGGAGAGGTAGATGGGTTGAAGAGAATGACATTGTCAATTTACCATACATTAATGCCATTGCTAAGGAAACAATGAGGCTTCACCCTGTGGCACCAATGCTTGTGCCAAGATTAGCCAGGGAGGACTTCAATGTTGATGGATATGATATCCCTAAAGGGACTCAAGTTCTTGTTAATACTTGGACTATTAGCAGAGATCCTGAAATTTGGGACAATCCAGATGAATTCCAACCAGAGAGGTTTCTAGATAAGGAGATAGATGTCAAAGGGCATGATTATGAGTTGTTGCCATTTGGTGCAGGTAGAAGGATGTGCCCTGGGTACCCTCTTGGCCTTAAGGTCATTCAATCAAGTTTGGCTAACCTATTGCACGGCTTTAATTGGAGACTGCCTGATAATACAAAGAAGGAGGACGTGAATATGGAGGAGATTTTTGGGCTGTCCACACCTAAGAAAATACCTCTAGAAACTGTTGTTGAGCCTAGACTTCCAGATCATCTTTATTCCCTCTGA 1554 0.4517 MSIELLASATPSWFTTAATWFATIAVLLLFSHRLRRRKYNLPPGPKPWPIIGNLNLIGSLPHRSIHSLSQKYGPIMHVWFGSNPVVVGSSVYMAKAFLKTHDATVAGRPKFAAGKYTTYNYSDITWSQYGPYWRQARKMCLMELFSAKRLESYEYIRKQELHAFLNELFNSANKTILLKDHLSDLSLNVISRMVLGKKYTEKSDNAIISPDEFKKMLDELFLLNGVLNIGDFIPWINFLDLQGYIKRMKALSKKFDRFMEHVLEEHIERRKGVEDYVAKDMVDVLLQLAEDPALEVKLERHGVKAFSQDLIAGGTESSAVTVEWAISELLRKPEIFKKATEELDRVIGRGRWVEENDIVNLPYINAIAKETMRLHPVAPMLVPRLAREDFNVDGYDIPKGTQVLVNTWTISRDPEIWDNPDEFQPERFLDKEIDVKGHDYELLPFGAGRRMCPGYPLGLKVIQSSLANLLHGFNWRLPDNTKKEDVNMEEIFGLSTPKKIPLETVVEPRLPDHLYSL. 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11448 517 CDD CYP71_clan 73 502 - -
Seca3g11448 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Seca3g11448 517 PANTHER CYTOCHROME P450 98A9 18 516 - -
Seca3g11448 517 Pfam Cytochrome P450 42 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11448 517 FunFam Cytochrome P450 84A1 33 510 - -
Seca3g11448 517 Gene3D Cytochrome P450 34 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11448 517 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11448 517 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11448 517 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11448 517 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11448 517 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11448 517 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11448 517 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11448 517 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11448 517 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11448 517 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11448 517 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11448 517 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11448 517 SUPERFAMILY Cytochrome P450 42 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11448 Seca-Chr3 262592800 262595114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11448 18 517 Cytochrome P450 AT5G07990 42.442 3.35e-143 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11448 K20623 - gmx:100790480 914.45