Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11443 ATGAAAGCACTAAATAGGTTATTCGGTTCAAGACGCAGAAAGCTTCATGGGGTTTTCAATGGCTTGTGTGCTATGGTTGTGTTTTTCTTCTTCTACAACAGGGAAGACATCATTCGTAATCCGATTCTTAGGCAATCCGCATATTTGGTGAATCATCGTTTGCCTCAAAACGCAATTTTGAAAGATGGGGTTTCTGTGATTCACCGTCGAATGGTTGACATCAGCCCCAACACTTCAATTGTAGCTGGTGAGCCTCGTGACGAAGATTTAGCTATAAAAAGGCCTGGACTGTGTGTTGAATTGCTCCACCATGATGGTTATTCTAGCCCCTGTGAATTCTTAAAGGCCAATCCTCAGTGCTCTTCTGAGGGGTATCTTGATTATTTGAGGTTTTTCTATTGTAAATGTCAAAATTTTAGAGTGCTTGGTTATCTAGTATTAGGTTTATGGGGTGCTGCTTTGTTTTATCTCTTGGGGAACACTGCAGCAGACTACTTTTGCCCTTCTCTTGAGCATCTCTCAAGGCTCTTGAAATTGCCTCCAACTGTGGCTGGGGTTGTGCTGCTTCCACTTGGGAATGGGGCACCTGATGTGTTTTCCAGTATAGCTTCCTTTGTAGGTACTGAAACAGGGGAAGTGGGTCTTAACAGCGTGTTAGGTGGTGCTCTATTTGTTACCACTGTTGTTGTTGGAACTGTTTGTCTGTGTGTTGCGGAAAGGGGGATTCAAATTGATCGAAGATGCTTTATCAGGGACGTGAGCTTCTTTCTACTCACTCTTGCTTCTCTGTTATTGATTTTGGTTGTTGGTAAGGTGGGTGTTGGGGCAGCCATTGCCTTTGTATCGATTTATGTTGTTTATGCATTCATTGTTGCTGCCAATGAGATACTACGGAAACATGCACATAGGCTGAAATTGGATGCTGTCACACCATTGCTTCCTGTCCAGGGAAGTGTGTTCTCTCTAGGTTCTGAAGAGGATGCTTCTGTCTATAGCTCTTTGCTTGACTTAGACACTGAAAGTGATCCTCCTCGTCTCCCTCCTTCCTTGCCACAGTGGATGTGGTCTTCAAATGTGGCAATATATTCAAACCAGGCAAATAAAATCAATTTTTTAGATGATGAAAGGCCTCCTTGGGGATGGAGTGATGAGCCCACAGAAAACACTAGGTTCTCATTCTCTGTTTCAAGACTTTTTTTACTGATGGAGATTCCACTGGCAATTCCTAGACGGCTAACCATTCCAATGGTCAATGAGGAAGTATGGTCAAAGCCATATGCTGTGGCCAGTGCTACAATGGCTCCCATTCTCCTGGCCTTTTTGTGGAGTACCCAAGATGATGTGAGTTATAAGAGCACTATACTTGCTTATTGTTTTGGTGTTACTGTTGGATGCACACTTGGTATTCTTGCATATAAATACACAGTGCCTGATCATCCACCTCCTCAGTATTTGATTCCCTGGGTTCTTGGAGGATTCCTCATGAGTATAGTGTGGTTCTACATAATAGCAAATGAGCTTGTGGCTCTATTAGTAGCATTTGGTGTAATTTTTGGAATTAATCCATCCATCCTGGGATTAACTGTATTAGCATGGGGAAATTCAATGGGAGATTTGATGTCAAATGTTGCATTGGCATTGGAGGGTGCAGATGGCGTTCAGATTGCTTTGTCTGGATGCTATGCAGGTCCTATGTTCAACACACTTGTTGGTTTGGGGATCTCCTTGCTGCTTGGGGCCTGGTCAAAGAAACCTTCTTTGTACGTGGTGCCGAAAGATGGTAGCTTATTTTACACCATGGGGTTTCTGATCGCTGGACTGCTATGTGCACTTGTTGTTTTACCACGCAACAACATGCATCCTAACAGAATATTAGGAATGGGTCTCATCACCCTTTATTTGCTATTTCTTTCTTTCAGAGTGTGCACTGCTATGGGGCTAATAACTGTTGCTGGTTTAAGTTGA 1965 0.431 MKALNRLFGSRRRKLHGVFNGLCAMVVFFFFYNREDIIRNPILRQSAYLVNHRLPQNAILKDGVSVIHRRMVDISPNTSIVAGEPRDEDLAIKRPGLCVELLHHDGYSSPCEFLKANPQCSSEGYLDYLRFFYCKCQNFRVLGYLVLGLWGAALFYLLGNTAADYFCPSLEHLSRLLKLPPTVAGVVLLPLGNGAPDVFSSIASFVGTETGEVGLNSVLGGALFVTTVVVGTVCLCVAERGIQIDRRCFIRDVSFFLLTLASLLLILVVGKVGVGAAIAFVSIYVVYAFIVAANEILRKHAHRLKLDAVTPLLPVQGSVFSLGSEEDASVYSSLLDLDTESDPPRLPPSLPQWMWSSNVAIYSNQANKINFLDDERPPWGWSDEPTENTRFSFSVSRLFLLMEIPLAIPRRLTIPMVNEEVWSKPYAVASATMAPILLAFLWSTQDDVSYKSTILAYCFGVTVGCTLGILAYKYTVPDHPPPQYLIPWVLGGFLMSIVWFYIIANELVALLVAFGVIFGINPSILGLTVLAWGNSMGDLMSNVALALEGADGVQIALSGCYAGPMFNTLVGLGISLLLGAWSKKPSLYVVPKDGSLFYTMGFLIAGLLCALVVLPRNNMHPNRILGMGLITLYLLFLSFRVCTAMGLITVAGLS. 655
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11443 654 Gene3D - 179 313 IPR044880 -
Seca3g11443 654 Gene3D - 427 642 IPR044880 -
Seca3g11443 654 Pfam Sodium/calcium exchanger protein 489 640 IPR004837 GO:0016020|GO:0055085
Seca3g11443 654 Pfam Sodium/calcium exchanger protein 149 291 IPR004837 GO:0016020|GO:0055085
Seca3g11443 654 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 20 648 - -
Seca3g11443 654 FunFam Cation/calcium exchanger 5 426 642 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca3g11443 Seca-Chr3 262482360 262484849 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11443 105 648 Antiporters AT5G17860 43.303 2.91e-140 418