Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11431 ATGTCCCACTTCCACTTCTTCTCTTGTTCTCTGTTGTTCAATTTTCCACATACGCAATTTTACCAAAATCAAAAACGCCAACTTTGGCGCAGTCTCTCTCTCTCTCTTTCTATCTCATTTCCACTCCAACTCAACTCAACCCAAAATCCAATCATGGAGCCACCGGAGAGCCTGCCGTTGGAAGCGGCGGAGAAGATCATCCTCCGGTGGGACTCCACCGCTTCGGAGGAAGCTCGTGAGAAGATGATATTCGACGGTGACCGTGAAGAGGTGGATCTCTACCTCCAAGCCGTTGATGAAATCCAACGGTCCATGTCCTCTGCTTCTCTCTCCGATGAACAGAGCAAGGTCAGTTCCGCCATCCAGATCGCTATGGCTCGCTTGGAAGATGAGTTTCGCAACATCCTCATCTCTCACACCAACCCCATCGACCCCACTTTCCCCTTTCACCACCCAAACCCTGAAGAAGACGAAGATCAACACCACCACTCTGTTTCTTCTTCATCAACACCTAAAAAACAGGACAATGATAATAATAATGATGATGATGGTGATGTTGAGGACAAGCTTCTTCGCTTTGACAGTGGAAGTTCCACTGTTTCTGCTTCTTCTTCCAGCCTCCGTAGTAGCTACCGTTCCACTAGCAGCATCCGTGAGATCGATCTGATACCCTCTGATGCTGTTTCTGACCTTCGTTGCATCGCTGAGAGGATGATCTCTTCTGGTTACTTGCGTGAGTGCATCCAGGTTTATGGCAGCGTTAGGAAATCCGCTGTGGATGCAAGTTTTCGGAGGCTTGGTGTTGAGAAGTTAAGCATCGGTGATGTTCAGAGGTTGGAGTGGGAACAGCTTGAGGCCAAGATCAGGCGTTGGATAAGAGCTGCTAAGGTCTGTGTTAGGACCTTGTTTGCTAGTGAGAAGAGGCTCTGTGAGCAAATCTTTGATGGGGTTGGAACTGCTATTGATGATGCTTGTTTCATGGAGACTGTGAAGGGACCTGCTATTCAGCTTTTCAACTTTGCTGAAGCCATCAGCATAAGCAGAAGGTCACCTGAGAAGCTGTTCAAGATTCTAGACCTGCATGATGCTTTGATGGATTTGATACCTGATATTGATATTGTGTTTGACTCTAAGTCCTCTGAGTCAATTCGTGTTCAAGCTGCTGAGATTCTTTCAAGGTTGGCTGAGGCTGCAAGAGGGATTTTGTCTGAGTTTGAGAATGCTGTGCTTAGGGAACCTTCTAAGGTTCCTGTCCCTGGTGGGACAATTCACCCTTTGACAAGGTATGTGATGAATTATATAAGTTTGATCTCTGATTACAAGCAGACTATGAATGAGCTTATAGTGTCTAAGCCATCAACTGGGTCTAGATATTCTGGTGATCCTTCAACCCCGGATATGGATTTTACTGAGTTGGAAGGGAAGACCCCTTTGGCTATTCACTTGATTTGGATTATTGTTATATTGCAATTTAACTTGGATGGTAAGTCCAAGCATTATAAAGATGCATCCTTGTGTCACTTGTTCATAATGAACAATGTGCACTACATTGTTCAGAAGGTTAGAGGGTCTCCTGAATTGAGGGAGATGATTGGAGATGATTATTTGAAGAAGCTGACAGGGAAATTCAGGCAAGCTGCTACTAGCTACCAGAGAGCAACTTGGGTGAGGGTGTTGTATTGTTTGAGGGATGAAGGGTTGCATGTGAGTGGTGGCTTTTCTTCTGGGGTCTCAAAGAGTGCTTTGAGAGAAAGGTTTAAGGCCTTCAATGCTATGTTTGAAGAGGTTCATAGGACTCAAGCTGTATGGTTGATACCAGATTCACAACTCAGGGAGGAGCTTCGGATATCTATATCAGAGAAGCTGATCCCAGCATATAGGTCATTCCTAGGGAGGTTCAGGAGTCACATAGAGAGTGGAAGGCATCCAGAGAACTACATTAAGTATTCTGTTGAAGACCTGGAGGATGCTGTTTTGGATTTTTTTGAAGGAATTCCTGTTTCTCAACACTTGAGGAGGAGATCTCAATGA 2031 0.4525 MSHFHFFSCSLLFNFPHTQFYQNQKRQLWRSLSLSLSISFPLQLNSTQNPIMEPPESLPLEAAEKIILRWDSTASEEAREKMIFDGDREEVDLYLQAVDEIQRSMSSASLSDEQSKVSSAIQIAMARLEDEFRNILISHTNPIDPTFPFHHPNPEEDEDQHHHSVSSSSTPKKQDNDNNNDDDGDVEDKLLRFDSGSSTVSASSSSLRSSYRSTSSIREIDLIPSDAVSDLRCIAERMISSGYLRECIQVYGSVRKSAVDASFRRLGVEKLSIGDVQRLEWEQLEAKIRRWIRAAKVCVRTLFASEKRLCEQIFDGVGTAIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALMDLIPDIDIVFDSKSSESIRVQAAEILSRLAEAARGILSEFENAVLREPSKVPVPGGTIHPLTRYVMNYISLISDYKQTMNELIVSKPSTGSRYSGDPSTPDMDFTELEGKTPLAIHLIWIIVILQFNLDGKSKHYKDASLCHLFIMNNVHYIVQKVRGSPELREMIGDDYLKKLTGKFRQAATSYQRATWVRVLYCLRDEGLHVSGGFSSGVSKSALRERFKAFNAMFEEVHRTQAVWLIPDSQLREELRISISEKLIPAYRSFLGRFRSHIESGRHPENYIKYSVEDLEDAVLDFFEGIPVSQHLRRRSQ. 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11431 676 Pfam Exo70 exocyst complex subunit 290 658 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca3g11431 676 MobiDBLite consensus disorder prediction 143 189 - -
Seca3g11431 676 PANTHER EXOCYST COMPLEX PROTEIN EXO70 60 664 IPR004140 GO:0000145|GO:0006887
Seca3g11431 676 MobiDBLite consensus disorder prediction 175 189 - -
Seca3g11431 676 SUPERFAMILY Cullin repeat-like 77 663 IPR016159 -
Seca3g11431 676 Gene3D Exocyst complex component Exo70 153 672 - -
Seca3g11431 676 MobiDBLite consensus disorder prediction 150 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11431 Seca-Chr3 262384801 262387085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11431 60 676 EXO70 exocyst subunit family AT1G72470 70.626 0.0 857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11431 K07195 - gmx:100808671 1004.59