Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11417 ATGTCTGTAGAAGCAGATCATCATTTGGGCATGGAGGAGGGAGAGACCAAAGCAGAAAAGAGCCTCAAAGACCGAAAGCTCTACCGCTTAGACTCTCTCAATTTGGAAGCTGGAAGAGTTCCCTTCTCTGCAAACCACTCCTCCAATTTGGGCTGGAGGACTACTCTGAGTTTAGCATTTCAATGCTTGGGCGTTGTATATGGTGACCTTGGCACATCTCCACTTTATGTGATATCAAGTACTTTCACAAACGGTATTGGTAACAAAGAAGACATTCTTGGGGCCTTGTCTCTCATAATCTACACCATTGTCTCCTTGCCCTTGATCAAATATGTCTTCATCGTACTATATGCTAACGACAATGGTTGCGGTGGAGCGTTGGCACTCTATTCATTGCTCTGTAGGCATGTGAAGTTGAGTTTGATTCCAAATCAACAACCTGAGGATAAGGAGCTTTCTAATTACAAACTCGAAACACCATCTAGCAAGGTGAAAAGAGCCCAAAAGCTAAAGCACAAGCTTGAGAATAGTTATTTTGCTCGGGTTATGCTTTTGCTTATAACCATATTGGGAACAACCATGGTTATAGGGGATGGGATTTTTACTCCAGCAATGTCAGTTCTTTCTGCAGTGAGTGGGGTCAGTACCTCGTTGGGTCAAGATGCTGTTGTGGGGATCACTGTAGTGATATTGGTCATCCTTTTTTCTATGCAACGATTTGGTACTGACAAAGTAGGATTTTCATTCGCTCCAATTATCTTGGTGTGGTTTTTATTAATTGGAGGAACTGGACTCTACAATGTGTTCAAGCATGACATTGGAGTATTACGTGCTTTTAATCCAAAATATATTGTTGAATACTTCCAACGGAATGGTAAACATGGATGGATATCACTGGGTGGAATCTTTCTGTGCATCTCAGGATGTGAGGCTATGTTTGCTGATTTGGGTCACTTTAATGTGCGAGCCATTCAAATTAGCTTCTCTTTTATTACATTTCCTGCAATATTAGCCGCATATTGTGGACAAGCAGCATATCTACGAAAGTTCCCTGAGAAAGTGTCTAATGTTTTTTATGCATGTATACCTGATCACTTATATTGGCCAACATTTGTTGTTGCTGTTGCTGCTTCCATCATAGCCAGCCAGGCAATAGTTTCAGGAGCATTTTCCATTGTATCACAGGCCCTAAATTTGGGTTGTTTCCCAAGTGTTAAGGTTGTGCATACTTCCCCTAAGCATGAGGGTCAGGTTTATATTCCTGAGCTCAACTACATGTTCATGATAGCATGTATTGCAGTTAGTGTTGCCTTCAGGACCTCAGACCAACTTGCTCATGCATATGGGATTGCAATAGTTTGTGATATGACAATCACAACATTCCTGGTTTCCTTTGTAATGTTGGTGGTATGGAAGAAAAGCATATGGTTGGTTTCTCTCTTCTTTGTGCCATTTGGTTGCATTGAGCTTGTTTATTTGTCAGCACAACTAACCAAGTTTACAGAAGGAGGTTTCCTTCCTCTTGTAACTGCTTTCTTCATAACTATGGTCATGGGAACCTGGTATTATGTACAAAAGGAAAGATACATGTTTGAACTGAAGAACAAGGTTTCCAGTGAGTATGTGAGAAAACTAGCCAATGACACAAACATAAAGCGTGTCCCTGGAATTGGATTTCTGTATTCTGAACTTGTACAAGGCATTCCTCCCATATTCCCTCACTTCATTGACAACATACCATGCATCCATTCAGTTGTTGTGTTTGTTTCCATTAAGGCAATTCCTATTAGTACAGTTGCATTGGAAGAAAGGTTTCTGTTTAGACAAGTGGAGCCAAGAGAATACAGAATATTTCGTTGTGTTGTGAGGCATGGTTATAGAGATGTGGTTGGAGATCCTTTGGAGTTTGAGTCCCAGTTACTACAACAACTGAAGGAATTTATTAGACAAGAAAGCTTGATGCTTAGTGTTGAGGGACCAACAACAGAACAAGTAGCTATTTCAACCAATGAGAGTGATGAGATCCAAGATCAAGGTTCCATTCAAACATTGGGTGTGGAAACTGAGATAAAATTTATTGAGAAAGCAATGGATCAGAAGGGTGTGGTGTATCTGCTAGGGGAAACAGAGGTAGTGGCAGATCCAAAATCATCTATCTTGAATAAGATAGTTGTGAACTATGGTTATAGCTTTCTGAGAAGGAACTTTCGGCAAAGGATAAATTGA 2226 0.4052 MSVEADHHLGMEEGETKAEKSLKDRKLYRLDSLNLEAGRVPFSANHSSNLGWRTTLSLAFQCLGVVYGDLGTSPLYVISSTFTNGIGNKEDILGALSLIIYTIVSLPLIKYVFIVLYANDNGCGGALALYSLLCRHVKLSLIPNQQPEDKELSNYKLETPSSKVKRAQKLKHKLENSYFARVMLLLITILGTTMVIGDGIFTPAMSVLSAVSGVSTSLGQDAVVGITVVILVILFSMQRFGTDKVGFSFAPIILVWFLLIGGTGLYNVFKHDIGVLRAFNPKYIVEYFQRNGKHGWISLGGIFLCISGCEAMFADLGHFNVRAIQISFSFITFPAILAAYCGQAAYLRKFPEKVSNVFYACIPDHLYWPTFVVAVAASIIASQAIVSGAFSIVSQALNLGCFPSVKVVHTSPKHEGQVYIPELNYMFMIACIAVSVAFRTSDQLAHAYGIAIVCDMTITTFLVSFVMLVVWKKSIWLVSLFFVPFGCIELVYLSAQLTKFTEGGFLPLVTAFFITMVMGTWYYVQKERYMFELKNKVSSEYVRKLANDTNIKRVPGIGFLYSELVQGIPPIFPHFIDNIPCIHSVVVFVSIKAIPISTVALEERFLFRQVEPREYRIFRCVVRHGYRDVVGDPLEFESQLLQQLKEFIRQESLMLSVEGPTTEQVAISTNESDEIQDQGSIQTLGVETEIKFIEKAMDQKGVVYLLGETEVVADPKSSILNKIVVNYGYSFLRRNFRQRIN. 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11417 741 MobiDBLite consensus disorder prediction 1 20 - -
Seca3g11417 741 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 51 738 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca3g11417 741 Pfam K+ potassium transporter 59 628 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca3g11417 741 NCBIfam potassium uptake protein 58 739 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11417 Seca-Chr3 262232173 262236362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11417 19 738 Inorganic Solute Cotransporters AT4G13420 55.705 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11417 K03549 - gmx:100798735 1068.14