Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11406 ATGGCCAAAGTTGGAAAGCTAACAAAGCTGAAATCAGCTATCAAGAGATGGCCCTCATTGACAAAGCTGAGCCGCAACAACAGCTGTGTCTCTTCCAATTCCAAAAAAGAAGAAGGCAGTGCCACCACCACTTCCTTCAAGGAACTGCATGCTGTCTATGTTGGCAAGTCAAGGAGGCGCTACCTTGTGAGCTCTGATGTGATCAATCACCCTGTGTTTCAGGAACTTGTGGACAGGTCTTCTTCTTCCTCTGGTGGCTGTGATGATCATGATGGGGTTGTTGTTTCCTGTGAGGTGGTTCTGTTTGAGCATTTGCTGTGGATGCTTGAGAGCTCTGAGACTCAATTGGGGTCCATGGATGAGCTGGTTGAGTTCTACACTTGTGCATGCTAG 393 0.4784 MAKVGKLTKLKSAIKRWPSLTKLSRNNSCVSSNSKKEEGSATTTSFKELHAVYVGKSRRRYLVSSDVINHPVFQELVDRSSSSSGGCDDHDGVVVSCEVVLFEHLLWMLESSETQLGSMDELVEFYTCAC. 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11406 130 PANTHER EXPRESSED PROTEIN 20 127 - -
Seca3g11406 130 Pfam Auxin responsive protein 15 109 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11406 Seca-Chr3 262126492 262126884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11406 51 124 Calmodulin-binding Proteins AT3G43120 32.000 7.50e-08 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11406 - - gmx:100797158 184.882