Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11405 ATGGTAACTTATGTTCCATACTCCATGGGAAGGATGGAGTATAATTGGGGGCCTGATGCAGCTTCATTTATACCTGAGAGATGGTTTAAGGATGGTGTTCTTCGAAATGAATCTCCATTCAAATTCACTGCTTTTCAGGCAGGGCCAAGAATATGCCTTGGCAAGGACTCTGCATATCTCCAAATGAGGATGGTACTTGCTATTCTGTGCAGATTTTACAAATTCAAATTGGTGCCTGGTCATCAAGTCAAATACAGGATGATGACTATATTATCAATGGAATATGGTTTGAAGCTTACCATAGAGAAACGTTCTTGA 318 0.3994 MVTYVPYSMGRMEYNWGPDAASFIPERWFKDGVLRNESPFKFTAFQAGPRICLGKDSAYLQMRMVLAILCRFYKFKLVPGHQVKYRMMTILSMEYGLKLTIEKRS. 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11405 105 Gene3D Cytochrome P450 1 104 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11405 105 Pfam Cytochrome P450 2 99 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11405 105 SUPERFAMILY Cytochrome P450 1 104 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11405 105 PANTHER CYTOCHROME P450 1 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11405 Seca-Chr3 262120089 262121170 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11405 1 105 Cytochrome P450 AT1G69500 81.905 2.76e-60 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11405 K20495 - gmx:100787802 202.986