Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11404 ATGAGAGAAGAGACTAACCTTGCATTAGTTGCTCTCTTTATGGGTCAATGCAACATAGGAGGGTTAGCACTACTCATTTGCATCATTGTTTCATGGATGTTCATACACAGATGGAGTCAAAGAAACAAGAAAGGCCCCAAAACTTGGCCATTTCTTGGAGCTGCCATTGAACAATTCATAAACTATGATAGGATGCATGATTGGCTTGTCCAATATTTGTCCAAGTCTAAAACTGTTGTGGTCCCTATGCCATTCACAACTTACACATACATTGCTGATCCTGCTAATGTGGAACATGTTCTTAAGACCAACTTCAGTAATTATCCAAAGGGTGAAGTGTACCATTCATATATGGAAGTGTTGCTTGGAGATGGGATATTTAATGCTGATGGTGAGCTTTGGAAGAAACAGAGGAAAACTGCAAGTTTAGAGTTTGCATCTAGGAATTTGAGGGATTTCAGCACCAAAGTTTTCAGGGAGTATGCCCTAAAACTCTCTTCCATTCTCAATCAAGCATCTCTCCTTAACAAAGAAATAGACATGCAGGAGTTGTTGATGAGAATGACTTTAGACTCCATATGTAAGGTGGGGTTTGGAGTGGAAATTGGAACATTGGCTCCTGATTTACCAGACAATCATTTTGCTCATGCCTTTGATAAAGCAAACATCATAGTAACTCTTCGCTTCATTGATCCACTATGGAAAATTAAGAAATTTCTAAATATAGGCTCAGAAGCACAACTTGACAAAAGCATCAAAGTCATTGATGATTTCACTTACTCTGTAATTCAAAGAAGGAAGGTAGAGATAGAAGATGTTAAAAAGAGTGGCCAACAAAATCAGATAAAACATGATATATTATCAAGATTCATTGAGTTGGGAGAAAGTAATGCTACAGATAAAAGTTTGAGAGATGTTGTCTTAAACTTTGTAATTGCTGGTAGAGACACAACTGCAACAACTCTATCATGGGCCATATATATGCTAATGACACATGCTCATGTTGCTGATAAACTTTATCTAGAGCTCAAAACTTTTGAGGAGAATCTAGCAAAGGAAGAGAACATTTCCTTGCTTCAATGTGACAAAGAGGACCCTGAATCATTCAATCAAAGAGTAGAACAATTTGCAAGGTTATTGAATAAAGATTCACTAGAGAAACTGTGTTATTTACATGCAGTCATAACAGAGACTTTAAGATTGTATCCAGCTGTTCCTCAGGTATGCATTTTCTCCATTCATTTTGTGCTTATTATCAAAATTCCACAAAAAGTGAGATAA 1281 0.3677 MREETNLALVALFMGQCNIGGLALLICIIVSWMFIHRWSQRNKKGPKTWPFLGAAIEQFINYDRMHDWLVQYLSKSKTVVVPMPFTTYTYIADPANVEHVLKTNFSNYPKGEVYHSYMEVLLGDGIFNADGELWKKQRKTASLEFASRNLRDFSTKVFREYALKLSSILNQASLLNKEIDMQELLMRMTLDSICKVGFGVEIGTLAPDLPDNHFAHAFDKANIIVTLRFIDPLWKIKKFLNIGSEAQLDKSIKVIDDFTYSVIQRRKVEIEDVKKSGQQNQIKHDILSRFIELGESNATDKSLRDVVLNFVIAGRDTTATTLSWAIYMLMTHAHVADKLYLELKTFEENLAKEENISLLQCDKEDPESFNQRVEQFARLLNKDSLEKLCYLHAVITETLRLYPAVPQVCIFSIHFVLIIKIPQKVR. 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11404 426 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11404 426 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11404 426 Coils Coil 336 356 - -
Seca3g11404 426 PANTHER CYTOCHROME P450 33 407 - -
Seca3g11404 426 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11404 426 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11404 426 PRINTS E-class P450 group I signature 392 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11404 426 SUPERFAMILY Cytochrome P450 45 407 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11404 426 Gene3D Cytochrome P450 36 413 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g11404 426 Pfam Cytochrome P450 45 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11404 Seca-Chr3 262117998 262119675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11404 24 407 Cytochrome P450 AT1G69500 72.774 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11404 K20495 - gmx:100787802 710.679